Job Description P76123 Confidence 99.43% Date Thu Jan 5 12:19:16 GMT 2012 Rank 65 Aligned Residues 249 % Identity 16% Template d2astb2 SCOP info Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) RNI-like Cyclin A/CDK2-associated p19, Skp2 Resolution 2.30

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																				.	.																																									.
Query SS confidence																				.	.																																									.
Query Sequence		K	T	I	T	L	N	D	N	H	I	A	H	L	N	A	K	N	T	.	.	T	K	L	E	Y	L	N	L	S	N	N	N	L	L	P	T	N	D	I	D	Q	L	I	S	S	K	H	L	W	H	V	L	V	N	G	I	N	N	D	P	.	L	A	Q	M	Q	Y	W	T	A	V	R	N	I	I	D	D	T	N	E
Query Conservation																				.	.																																									.
Alig confidence																				.	.																																									.
Template Conservation
Template Sequence		Q	T	L	D	L	T	G	K	N	L	H	P	D	V	T	G	R	L	L	S	Q	G	V	I	A	F	R	C	P	R	S	F	M	D	Q	P	L	A	E	H	F	S	P	F	R	V	Q	H	M	D	L	S	N	S	V	I	E	V	S	T	L	H	G	I	L	S	Q	C	S	K	L	Q	N	L	S	L	E	G	L	R
Template Known Secondary structure		S					T	T		B												T	T		S					T	T					S				S					B								T	T													T	T	B				S					T	T		B
Template Predicted Secondary structure
Template SS confidence
		2138	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	I	D	L	S	G	L	N	L	T	T	Q	P	P	G	L	Q	N	F	T	S	I	N	L	D	N	N	Q	F	T	H	F	D	A	T	N	Y	D	R	L	V	K	L	S	L	N	S	N	A	L	E	S	I	N	F	P	Q	G	R	N	V	S	I	T	H	I	S	M	N	N	N	A	L	R	N	I	D	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	D	P	I	V	N	T	L	A	K	N	S	N	L	V	R	L	N	L	S	G	C	S	G	F	S	E	F	A	L	Q	T	L	L	S	S	C	S	R	L	D	E	L	N	L	S	W	C	F	D	F	T	E	K	H	V	Q	V	A	V	A	H	V	S	E	T	I	T	Q	L	N	L	S	G	Y	R	K	N	L
Template Known Secondary structure											T	T		T	T		S					T	T		B	S														T	T										T	T													S		T	T								S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		2218	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	S	V	T	Y	F	S	A	A	H	N	Q	L	E	F	V	Q	L	E	S	C	E	W	L	Q	Y	L	N	L	S	H	N	Q	L	T	D	I	V	A	G	N	K	N	E	L	L	L	L	D	L	S	H	N	K	L	T	S	L	H	N	D	L	F	P	N	L	N	T	L	L	I	N	N	N	L	L	S	E
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	S	D	L	S	T	L	V	R	R	C	P	N	L	V	H	L	D	L	S	D	S	V	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	D
Template Known Secondary structure														T	T		S					T	T		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2298	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.																																																				.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		I	K	I	F	Y	S	N	F	C	N	V	Q	T	L	N	A	A	N	.	N	Q	L	K	Y	I	N	L	D	F	L	T	Y	L	P	S	I	K	S	L	R	L	D	N	N	K	I	T	H	I	D	T	N	N	T	S	D	I	G	T	L	F	P	I	I	K	Q	S	K
Query Conservation																				.
Alig confidence																				.																										.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		C	F	Q	E	F	F	Q	L	N	Y	L	Q	H	L	S	L	S	R	C	Y	D	I	I	P	E	T	L	L	E	L	G	E	I	P	T	L	K	T	L	Q	V	F	G	I	.	.	.	.	V	P	D	G	T	L	Q	L	L	K	E	A	L	P	H	L	Q	I	N	C
Template Known Secondary structure		G	G	G	G	G	G	G		T	T							T	T		T	T			G	G	G	G	G	G	G	G	G		T	T							T	T	S	.	.	.	.	S		T	T									S	T	T	S			S
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		2327	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370					.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.	.	.	.	.	2390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions