Job Description P76123 Confidence 99.77% Date Thu Jan 5 12:19:16 GMT 2012 Rank 44 Aligned Residues 306 % Identity 7% Template d1z7xw1 SCOP info Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) RNI-like 28-residue LRR Resolution 1.95

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																		.	.	.	.																				.	.	.	.	.
Query SS confidence																		.	.	.	.																				.	.	.	.	.
Query Sequence		R	M	K	T	I	T	L	N	D	N	H	I	A	H	L	N	.	.	.	.	A	K	N	T	T	K	L	E	Y	L	N	L	S	N	N	N	L	L	P	.	.	.	.	.	T	N	D	I	D	Q	L	I	S	S	K	H	L	W	H	V	L	V	N	G	I	N	N	D	P	L	A	Q	M	Q	Y	W	T	A	V	R
Query Conservation																		.	.	.	.																				.	.	.	.	.
Alig confidence																		.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		D	I	Q	S	L	D	I	Q	C	E	E	L	S	D	A	R	W	A	E	L	L	P	L	L	Q	Q	C	Q	V	V	R	L	D	D	C	G	L	T	E	A	R	C	K	D	I	S	S	A	L	R	V	N	P	A	L	A	E	L	N	L	R	S	N	E	L	G	D	V	G	V	H	C	V	L	Q	G	L	Q	T	P
Template Known Secondary structure										S																T	T		S						S	S																T		T	T							T	T														T	T		S	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	I	D	D	T	N	E	V	T	I	D	L	S	G	L	N	L	T	T	Q	P	P	G	L	Q	N	F	T	S	I	N	L	D	N	N	Q	F	T	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	C	K	I	Q	K	L	S	L	Q	N	C	C	L	T	G	A	G	C	G	V	L	S	S	T	L	R	T	L	P	T	L	Q	E	L	H	L	S	D	N	L	L	G	D	A	G	L	Q	L	L	C	E	G	L	L	D	P	Q	C	R	L	E	K	L	Q	L	E	Y	C	S	L	S	A	A	S	C	E	P	L	A
Template Known Secondary structure		T									T	T	S			B	G	G	G								T	T	S		T	T								S	S	B														T	S	T	T									T	T	S			B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	L	R	A	K	P	D	F	K	E	L	T	V	S	N	N	D	I	N	E	A	G	V	R	V	L	C	Q	G	L	K	D	S	P	C	Q	L	E	A	L	K	L	E	S	C	G	V	T	S	D	N	C	R	D	L	C	G	I	V	A	S	K	A	S	L	R	E	L	A	L	G	S	N	K	L	G	D	V	G
Template Known Secondary structure								T	T								S	S	B																S										T	T	S			B	T	T													T	T								S	S	B
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
																124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	T	N	Y	D	R	L	V	K	L	S	L	N	S	N	A	L	E	S	I	N	F	P	Q	G	R	N	V	S	I	T	H	I	S	M	N	N	N	A	L	R	N	I	D	I	D	R	L	S	S	V	T	Y	F	S	A	A	H	N	Q	L	E	F	V	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	E	L	C	P	G	L	L	H	P	S	S	R	L	R	T	L	W	I	W	E	C	G	I	T	A	K	G	C	G	D	L	C	R	V	L	R	A	K	E	S	L	K	E	L	S	L	A	G	N	E	L	G	D	E	G	A	R	L	L	C	E	T	L	L	E	P	G	C	Q	L	E	S	L	W	V	K	S	C
Template Known Secondary structure										T	S	T	T									T	T	S																		T	T							T	T																T	S	T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		L	E	S	C	E	W	L	Q	Y	L	N	L	S	H	N	Q	L	T	D	I	V	A	G	N	K	N	E	L	L	L	L	D	L	S	H	N	K	L	T	S	L	H	N	D	L	F	P	N	L	N	T	L	L	I	N	N	N	L	L	S	E	.	.	.	.	.	I	K	I	F	Y	S	N	F	C	N	V	Q	T	L
Query Conservation																																																															.	.	.	.	.
Alig confidence																																																															.	.	.	.	.
Template Conservation
Template Sequence		S	F	T	A	A	C	C	S	H	F	S	S	V	L	A	Q	N	R	F	L	L	E	L	Q	I	S	N	N	R	L	E	D	A	G	V	R	E	L	C	Q	G	L	G	Q	P	G	S	V	L	R	V	L	W	L	A	D	C	D	V	S	D	S	S	C	S	S	L	A	A	T	L	L	A	N	H	S	L	R	E	L
Template Known Secondary structure				B	G	G	G												S	S								S	S	B														T	S	T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		N	A	A	N	N	Q	L	K	Y	I	N	L	D	F	L	T	Y	L	.	.	.	.	.	P	S	I	K	S	L	R	L	D	N	N	K	I	T	H	I	D	T	N	N	T	S	D	I	G	T	L	F	P	I	I	K	Q	S	K
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.
Template Conservation
Template Sequence		D	L	S	N	N	C	L	G	D	A	G	I	L	Q	L	V	E	S	V	R	Q	P	G	C	L	L	E	Q	L	V	L	Y	D	I	Y	W	S	E	E	M	E	D	R	L	Q	A	L	E	K	D	K	P	S	L	R	V	I	S
Template Known Secondary structure					S	S	S														T	S	T	T									T	T																			T	T	S
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460