Job Description P76123 Confidence 99.92% Date Thu Jan 5 12:19:16 GMT 2012 Rank 22 Aligned Residues 291 % Identity 13% Template d1jl5a_ SCOP info Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like Leucine rich effector protein YopM Resolution 2.10

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	K	T	I	T	L	N	D	N	H	I	A	H	L	N	A	K	N	T	T	K	L	E	Y	L	N	L	S	N	N	N	L	L	P	T	N	D	I	D	Q	L	I	S	S	K	H	L	W	H	V	L	V	N	G	I	N	N	D	P	L	A	Q	M	Q	Y	W	T	A	V	R	N	I	I	D	D	T	N	E	V
Query Conservation
Alig confidence																		.																																														.
Template Conservation																		.																																														.
Template Sequence		Q	A	H	E	L	E	L	N	N	L	G	L	S	S	L	P	.	E	L	P	P	H	L	E	S	L	V	A	S	C	N	S	L	T	E	L	P	E	L	P	Q	S	L	K	S	L	L	V	D	N	N	N	L	K	A	L	S	D	L	P	P	L	.	L	E	Y	L	G	V	S	N	N	Q	L	E	K	L	P	E	L
Template Known Secondary structure		T		S					T	T	S			S				.	S			T	T		S						S	S			S	S						T	T								S	S			S				S			T	T	.								S	S			S	S
Template Predicted Secondary structure																		.																																														.
Template SS confidence
		1072	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.		.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.		.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	D	L	S	G	L	N	L	T	T	Q	P	P	G	L	Q	N	F	T	S	I	N	L	D	N	N	Q	F	T	H	F	D	A	T	N	Y	D	R	L	V	K	L	S	L	N	S	N	A	L	E	S	I	N	F	P	Q	G	R	N	V	S	I	T	H	I	S	M	N	N	N	A	L	R	N	I	D	I	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	S	S	F	L	K	I	I	D	V	D	N	N	S	L	K	K	L	P	D	L	P	P	S	L	E	F	I	A	A	G	N	N	Q	L	E	E	L	P	E	L	Q	N	L	P	F	L	T	A	I	Y	A	D	N	N	S	L	K	K	L	P	D	L	P	L	S	L	E	S	I	V	A	G	N	N	I	L	E	E
Template Known Secondary structure		T	T		T	T								S	S			S							T	T								S	S			S	S					T	T		T	T								S	S			S	S						T	T								S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	S	V	T	Y	F	S	A	A	H	N	Q	L	E	F	V	Q	L	E	S	C	E	W	L	Q	Y	L	N	L	S	H	N	Q	L	T	D	I	V	A	G	N	K	N	E	L	L	L	L	D	L	S	H	N	K	L	T	S	L	H	N	D	L	F	P	N	L	N	T	L	L	I	N	N	N	L	L	S	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	E	L	Q	N	L	P	F	L	T	T	I	Y	A	D	N	N	L	L	K	T	L	P	D	L	P	P	S	L	E	A	L	N	V	R	D	N	Y	L	T	D	L	P	E	L	P	Q	S	L	T	F	L	D	V	S	E	N	I	F	S	G	L	S	E	L	P	P	N	L	Y	Y	L	N	A	S	S	N	E	I
Template Known Secondary structure						T	T		T	T								S	S			S	S			S			T	T								S	S			S							T	T								S	S			S			S				T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	F	Y	S	N	F	C	N	V	Q	T	L	N	A	A	N	N	Q	L	K	Y	I	N	L	D	F	L	T	Y	L	P	S	I	K	S	L	R	L	D	N	N	K	I	T	H	I	D	T	N	N	T	S	D	I	G	T	L
Query Conservation
Alig confidence																										.	.	.	.																					.
Template Conservation																										.	.	.	.																					.
Template Sequence		R	S	L	C	D	L	P	P	S	L	E	E	L	N	V	S	N	N	K	L	I	E	L	P	.	.	.	.	A	L	P	P	R	L	E	R	L	I	A	S	F	N	H	L	A	E	V	P	.	E	L	P	Q	N	L	K	Q	L
Template Known Secondary structure		S							T	T								S	S			S				.	.	.	.				T	T								S	S			S				.				T	T
Template Predicted Secondary structure																										.	.	.	.																					.
Template SS confidence
		1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.					.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.		.	.	.	.	.	.	1360	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions