Return to main results Retrieve Phyre Job Id

Job DescriptionP76123
Confidence98.27%DateThu Jan 5 12:19:16 GMT 2012
Rank75Aligned Residues58
% Identity16%Templatec3rfeB_
PDB info PDB header:cell adhesionChain: B: PDB Molecule:platelet glycoprotein ib beta chain; PDBTitle: crystal structure of glycoprotein gpib ectodomain
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   239240.........250.........260.........270.........280.........290......
Predicted Secondary structure 















































Query SS confidence 

























































Query Sequence  NTLLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKIT
Query Conservation      
  
           
  
  
 

 
 
  
    
  
  
  
 

 
 
 
Alig confidence 

























































Template Conservation    
 

   

   

  

     
 
  
 
  
       
  
  
 
  

  
Template Sequence  TLVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR
Template Known Secondary structure  T

SS


TTTS
S


TT


TTS

SS

TTTTTT
TT



SS

B
Template Predicted Secondary structure 







































Template SS confidence 

























































   10.........20.........30.........40.........50.........60.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions