Job Description P76123 Confidence 98.25% Date Thu Jan 5 12:19:16 GMT 2012 Rank 76 Aligned Residues 293 % Identity 9% Template c3oglD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:coronatine-insensitive protein 1; PDBTitle: structure of coi1-ask1 in complex with ja-isoleucine and the jaz12 degron Resolution 3.18 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.								.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence		L	I	L	H	N	H	P	R	M	K	T	I	T	L	N	D	N	H	I	A	H	L	N	.	.	.	.	.	.	.	A	K	N	T	T	K	L	E	Y	L	N	L	S	N	N	N	L	L	P	T	N	D	I	D	Q	L	I	S	S	K	H	L	W	H	V	L	V	N	G	I	N	N	D	P	L	A	Q	M	Q	Y
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	A	Q	H	N	T	S	L	E	V	L	N	F	Y	M	T	E	F	A	K	I	S	P	K	D	L	E	T	I	A	R	N	C	R	S	L	V	S	V	K	V	G	D	F	E	I	L	E	L	V	G	F	F	K	A	A	A	N	L	E	E	F	C	G	G	S	L	N	E	D	I	G	M	P	E	K	Y	M	N
Template Known Secondary structure																T	T					S														T	T							S	S		B	G	G	G	G								T	T								B					T	T		T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	A	V	R	N	I	I	D	D	T	N	E	V	T	I	D	L	S	G	L	N	L	T	T	Q	P	P	G	L	Q	N	F	T	S	I	N	L	D	N	N	Q	F	T	H	F	D	A	T	N	Y	D	R	L	V	K	L	S	L	N	S	N	A	L	E	S	I	N	F	P	Q	G	R	N	V	S	I	T	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	F	P	R	K	L	C	R	L	G	L	S	Y	M	G	P	N	E	M	P	I	L	F	P	F	A	A	Q	I	R	K	L	D	L	L	Y	A	L	L	E	T	E	D	H	C	T	L	I	Q	K	C	P	N	L	E	V	L	E	T	R	N	V	I	G	D	R	G	L	E	V	L	A	Q	Y	C	K	Q	L	K
Template Known Secondary structure						T	T							T	T			T	T	T	G	G	G	G	G	G	G	T	T	T							T	T													T	T		T	T								G	G	G													T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		S	M	N	N	N	A	L	R	N	I	D	I	D	R	L	S	S	V	T	Y	F	S	A	A	H	N	Q	L	E	F	V	Q	L	E	S	C	E	W	L	Q	Y	L	N	L	S	H	N	Q	L	T	D	I	V	A	G	N	K	N	E	L	L	L	L	D	L	S	H	N	K	L	T	S	L	H	N	D	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																																															.	.	.
Template Conservation
Template Sequence		R	L	R	I	E	R	G	A	D	E	Q	G	M	E	D	E	E	G	L	V	S	Q	R	G	L	I	A	L	A	Q	G	C	Q	E	L	E	Y	M	A	V	Y	V	S	D	I	T	N	E	S	L	E	S	I	G	T	Y	L	K	N	L	C	D	F	R	L	V	L	L	D	R	E	E	R	I	T	D	L	P	L	D
Template Known Secondary structure											S	S	S	S	S	S	S	S				B												T	T									S	B														T	T										S	S		S			S	S
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
											235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.					.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																						.	.	.	.																									.
Query SS confidence		.	.	.	.	.	.	.	.	.																						.	.	.	.																									.
Query Sequence		.	.	.	.	.	.	.	.	.	F	P	N	L	N	T	L	L	I	N	N	N	L	L	S	E	I	K	I	F	Y	.	.	.	.	S	N	F	C	N	V	Q	T	L	N	A	A	N	N	Q	L	K	Y	I	N	L	D	F	L	.	T	Y	L	P	S	I	K	S	L	R	L	D	N	N	K	I	T	H
Query Conservation		.	.	.	.	.	.	.	.	.																						.	.	.	.																									.
Alig confidence		.	.	.	.	.	.	.	.	.																						.	.	.	.																									.
Template Conservation
Template Sequence		N	G	V	R	S	L	L	I	G	C	K	K	L	R	R	F	A	F	Y	L	R	Q	G	G	L	T	D	L	G	L	S	Y	I	G	Q	Y	S	P	N	V	R	W	M	L	L	G	Y	V	G	E	S	D	E	G	L	M	E	F	S	R	G	C	P	N	L	Q	K	L	E	M	R	G	C	C	F	S	E
Template Known Secondary structure												T	T										G	G	G												T		S	S								S			S	S									T			T	T								S				B
Template Predicted Secondary structure
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions