Job Description P76123 Confidence 99.62% Date Thu Jan 5 12:19:16 GMT 2012 Rank 56 Aligned Residues 287 % Identity 13% Template c3gozA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:leucine-rich repeat-containing protein; PDBTitle: crystal structure of the leucine-rich repeat-containing2 protein legl7 from legionella pneumophila. northeast3 structural genomics consortium target lgr148 Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.									.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.
Query Sequence		I	T	D	L	I	L	H	N	H	P	R	M	K	T	I	T	L	N	D	N	H	I	A	H	L	N	A	K	N	T	.	.	.	.	.	.	.	.	T	K	L	E	Y	L	N	L	S	N	N	N	L	L	P	T	N	D	I	D	Q	L	I	S	S	K	H	L	W	H	V	L	V	N	G	I	N	N	D	P	L	A
Query Conservation																																.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	E	E	F	T	S	I	P	H	G	V	T	S	L	D	L	S	L	N	N	L	Y	S	I	S	T	V	E	L	I	Q	A	F	A	N	T	P	A	S	V	T	S	L	N	L	S	G	N	S	L	G	F	K	N	S	D	E	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	S		T	T							T	T	S		G	G	G	S											T			T	T								S	S		G	G	G	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	Q	Y	W	T	A	V	R	N	I	I	D	D	T	N	E	V	T	I	D	L	S	G	L	N	L	T	T	Q	P	P	G	L	Q	N	F	T	S	I	N	L	D	N	N	Q	F	T	H	F	D	A	T	N	Y	D	R	L	V	K	L	S	L	N	S	N	A	L	E	S	I	N	F	P	Q	G	R	N	V	S
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	Q	I	L	A	A	I	P	A	N	V	T	S	L	N	L	S	G	N	F	L	S	Y	K	S	S	D	E	L	V	K	T	L	A	A	I	P	F	T	I	T	V	L	D	L	G	W	N	D	F	S	S	K	S	S	S	E	F	K	Q	A	F	S	N	L	P	A	S	I	T	S	L	N	L	R	G
Template Known Secondary structure		.	.	.	.	.					T	S		T	T								S	S		G	G	G	S											T	S		T	T								S	S		G	G	G	S										T	T	S		T	T							T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	H	I	S	M	N	N	N	A	L	R	N	I	D	I	D	R	L	S	S	V	T	Y	F	S	A	A	H	N	Q	L	E	F	V	Q	L	E	S	C	E	W	L	Q	Y	L	N	L	S	H	N	Q	L	T	D	I	V	A	G	N	K	N	E	L	L	L	L	D	L	S	H	N	K	L	T	S	L	H	N	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	D	L	G	I	K	S	S	D	E	L	I	Q	I	L	A	A	I	P	A	N	V	N	S	L	N	L	R	G	N	N	L	A	S	K	N	C	A	E	L	A	K	F	L	A	S	I	P	A	S	V	T	S	L	D	L	S	A	N	L	L	G	L	K	S	Y	A	E	L	A	Y	I	F	S	S	I	P	N	H	V
Template Known Secondary structure		S		G	G	G	S											T	S		T	T							T	T	S		G	G	G	S											T	S		T	T							T	T	S		G	G	G	S												S		T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.					280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		L	F	P	N	L	N	T	L	L	I	N	N	N	L	L	S	E	I	K	I	F	Y	S	N	F	C	N	V	Q	T	L	N	A	A	N	N	Q	L	K	Y	I	N	L	D	F	L	.	.	.	.	T	Y	L	P	S	I	K	S	L	R	L	D	N	N	K	I	T	H	I	D	T	N	N	T	S	D	I	G	T	L
Query Conservation																																																.	.	.	.
Alig confidence																																																.	.	.	.
Template Conservation
Template Sequence		V	S	L	N	L	C	L	N	C	L	H	G	P	S	L	E	N	L	K	L	L	K	D	S	L	K	H	L	Q	T	V	Y	L	D	Y	D	I	V	K	N	X	S	K	E	Q	C	K	A	L	G	A	A	F	P	N	I	Q	K	I	I	L	V	D	K	N	G	K	E	I	H	P	S	H	S	I	P	I	S	N	L
Template Known Secondary structure								S	S													T	T	T	T	T	T	T		S										T	T											T	T	S	T	T									T	T	S		B			G	G	G
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions