Job Description P76123 Confidence 97.99% Date Thu Jan 5 12:19:16 GMT 2012 Rank 79 Aligned Residues 65 % Identity 8% Template c2p1nE_ PDB info PDB header:signaling protein Chain: E: PDB Molecule:transport inhibitor response 1 protein; PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.																				.	.
Query SS confidence																										.	.	.	.																				.	.
Query Sequence		D	L	I	L	H	N	H	P	R	M	K	T	I	T	L	N	D	N	H	I	A	H	L	N	.	.	.	.	A	K	N	T	T	K	L	E	Y	L	N	L	S	N	N	N	L	L	P	.	.	T	N	D	I	D	Q	L	I	S	S	K	H	L	W	H	V	L	V	N	G	I	N
Query Conservation																										.	.	.	.																				.	.
Alig confidence																										.	.	.	.																				.	.
Template Conservation
Template Sequence		E	Y	I	G	T	Y	A	K	K	M	E	M	L	S	V	A	F	A	G	D	S	D	L	G	M	H	H	V	L	S	G	C	D	S	L	R	K	L	E	I	R	D	C	P	F	G	D	K	A	L	L	A	N	A	S	K	L	E	T	M	R	S	L	W	M	S	S	C	S	V	S
Template Known Secondary structure									T	T								S			S	S												T	T								S		S		B							T	S	G	G	G	G	G	S	S						S	S	B		B
Template Predicted Secondary structure
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions