Job Description P37744 Confidence 99.96% Date Thu Jan 5 11:57:17 GMT 2012 Rank 35 Aligned Residues 232 % Identity 19% Template c3polA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: 2.3 angstrom crystal structure of 3-deoxy-manno-octulosonate2 cytidylyltransferase (kdsb) from acinetobacter baumannii. Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	R	K	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	T	M	A	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L	N	L	Q	Y	K
Query Conservation
Alig confidence																			.	.	.	.	.	.																																					.	.	.	.	.
Template Conservation																			.	.	.	.	.	.																																					.	.	.	.	.
Template Sequence		H	M	K	H	I	V	I	P	A	R	F	S	S	S	R	L	P	.	.	.	.	.	.	G	K	P	L	L	L	I	H	D	R	P	M	I	L	R	V	V	D	Q	A	K	K	V	E	G	F	D	D	L	C	V	A	T	D	D	E	.	.	.	.	.	R	I	A	E	I	C	R	A	E	G	V	D	V	V	L	T
Template Known Secondary structure												S			T	T	S	T	.	.	.	.	.	.	T	G	G	G	S			T	T												T	T			S		S							S			.	.	.	.	.								T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.																																					.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.							.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.
Predicted Secondary structure																								.											.	.																				.																.	.	.	.	.
Query SS confidence																								.											.	.																				.																.	.	.	.	.
Query Sequence		V	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	F	I	G	G	D	.	D	C	A	L	V	L	G	D	N	I	.	.	F	Y	G	H	D	L	P	K	L	M	E	A	A	V	N	K	E	S	G	.	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G	.	.	.	.	.	V	V	E	F	D
Query Conservation																								.											.	.																				.																.	.	.	.	.
Alig confidence																								.											.	.																				.																.	.	.	.	.
Template Conservation
Template Sequence		S	A	D	H	P	S	G	T	D	R	L	S	E	V	A	R	I	K	G	W	D	A	D	D	I	I	V	N	V	Q	G	D	E	P	L	L	P	A	Q	L	V	Q	Q	V	A	K	L	L	V	D	K	P	N	C	S	M	S	T	L	C	E	P	I	H	A	L	D	E	F	Q	R	D	S	I	V	K	V	V	M	S
Template Known Secondary structure			S																	T			T	T								T	T		T	T																	T	T		S																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160														.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	G	T	A	I	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	K	P	L	E	P	K	S	N	Y	A	V	T	G	L	Y	F	Y	D	N	D	V	V	Q	M	A	K	N	L	K	P	S	A	R	G	E	L	E	I	T	D	I	N	R	I	Y	L	E	Q	G	R	L	S	V	A	M	M	G
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Template Conservation																																																																				.
Template Sequence		K	Q	N	E	A	L	Y	F	S	R	A	T	I	P	Y	D	R	D	G	A	K	R	D	E	P	T	L	H	T	Q	A	F	R	H	L	G	L	Y	A	Y	R	V	S	L	L	Q	E	Y	V	T	W	E	M	G	K	L	E	K	L	E	S	L	E	Q	L	R	.	V	L	E	N	G	H	R	I	A	I	A	V	A
Template Known Secondary structure		S	S	S	B						S	S			S			S	S	S	S	S	S	S	S					S																				T	T	S										T		T	T			.				T	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	A	W	L	D	T	G	T	H	Q	S	L	I	E	A	S	N	F	I	A	T	I	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	N	L	P	P	G	V	D	T	Q	A	D	L	D	R	L	N	N	M	P	V	E	S	F	E
Template Known Secondary structure		S	S								S									T	S		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions