35 c3polA_ Probab=99.96   E-value=1.8e-27  Score=175.78  Aligned_columns=232  Identities=19%

Q ss_pred             CCCEEEEECCCCCCCCCCCCCCCCCEEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             87389992588973320001279820111672767999999998489978999918740899999974100048804423
Q batch____         2 KMRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYK   81 (293)
Q Consensus         2 ki~kaiILAaG~GtRl~plT~~~PK~llpi~gkpli~~~l~~l~~~gi~~i~iv~~~~~~~~i~~~l~~~~~~~~~~~~~   81 (293)
                      |++-+||+|||.||||.      ||||+||+|||||+|+++.+..+|+.+.++|+++..     +.......++......
T Consensus         9 ~~~~vIi~A~~~s~Rl~------~K~Ll~v~Gkpli~~~i~~l~~~~~~~~iiVv~~~~-----~~~~~~~~~~~~~~~~   77 (262)
T c3polA_           9 HMKHIVIPARFSSSRLP------GKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDE-----RIAEICRAEGVDVVLT   77 (262)
T ss_dssp             CCEEEEEECCSCCTTST------TGGGSEETTEEHHHHHHHHHTTCCSCSEEEEEESCH-----HHHHHHHTTTCEEEEC
T ss_pred             CCEEEEEECCCCCCCCC------CCEEEEECCEEHHHHHHHHHHHCCCCCEEEEECCHH-----HHHHHHHHCCCCEEEE
T ss_conf             87599994487788998------711443685657999999998489982899976958-----8899997539949996


Q ss_pred             CCCCCCCHHHHHHHHHHHCCCC-CEEEECCCCE--EEHHHHHHHHHHHHHCCCC-EEEEEEECCCCCCCE-----EEEEC
Q ss_conf             4324389699999745416886-6086449937--6033499999999965993-999999887777512-----99988
Q batch____        82 VQPSPDGLAQAFIIGEEFIGGD-DCALVLGDNI--FYGHDLPKLMEAAVNKESG-ATVFAYHVNDPERYG-----VVEFD  152 (293)
Q Consensus        82 ~~~~~~gta~ai~~a~~~~~~~-~~~lv~~~d~--~~~~~~~~~~~~~~~~~~~-~ti~~~~~~~~~~~g-----~v~~d  152 (293)
                      .+....++.++...+....... +.+++..+|.  +.+..+..+++.+...... +.....+..++..++     .+..+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~d~p~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (262)
T c3polA_          78 SADHPSGTDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMS  157 (262)
T ss_dssp             CSCCCCHHHHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEEEEC
T ss_pred             CCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCCCEEEEEC
T ss_conf             48876512689999985004689889998289533359999999999997699357564454048767067771289986


Q ss_pred             CCCEEEEE-------------EECCCCCCCCEEEEEEEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEE
Q ss_conf             99729999-------------98788874459999899448899988873678888842111178899973981899980
Q batch____       153 KNGTAISL-------------EEKPLEPKSNYAVTGLYFYDNDVVQMAKNLKPSARGELEITDINRIYLEQGRLSVAMMG  219 (293)
Q Consensus       153 ~~g~v~~~-------------~EKp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~e~~~~d~~~~l~~~g~~~~~~~~  219 (293)
                      .+|++..|             .+++......+.++|+|.|..+.++.+....++..+.....+.++ +++.|..+.++..
T Consensus       158 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~~~l~-~i~~g~~v~~~~~  236 (262)
T c3polA_         158 KQNEALYFSRATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLR-VLENGHRIAIAVA  236 (262)
T ss_dssp             SSSBEEEEESSCCSCCSSSSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCHHHHHHTCTTHH-HHHTTCCEEEEEC
T ss_pred             CCCCEEEEECCCCCCCCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH-HHHCCCCEEEEEC
T ss_conf             899587730234422222101232201210121112133229999987604876201344577899-9968980699981


Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCH
Q ss_conf             69589855998999999999971110
Q batch____       220 RGYAWLDTGTHQSLIEASNFIATIEE  245 (293)
Q Consensus       220 ~~~~W~Digt~~dl~~a~~~~~~~~~  245 (293)
                      ++..|.|||||+||.+|++.+....+
T Consensus       237 ~~~~~~dIdtpeDL~~ae~l~~~~~~  262 (262)
T c3polA_         237 EANLPPGVDTQADLDRLNNMPVESFE  262 (262)
T ss_dssp             SSCCCCCCCSHHHHHHHHTSCGGGGC
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             62020068899999999999531069