Return to main results Retrieve Phyre Job Id

Job DescriptionP0C243
Confidence36.25%DateThu Jan 5 11:30:03 GMT 2012
Rank6Aligned Residues28
% Identity32%Templatec2znrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:amsh-like protease; PDBTitle: crystal structure of the dub domain of human amsh-lp
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   82.......90.........100.... .....
Predicted Secondary structure 


.
Query SS confidence 






















.




Query Sequence  RQVTVPAVMLEKVMALAGSEMKR. LYAVG
Query Conservation 
 




 


 
  



   
.
    
Alig confidence 






















.




Template Conservation 
 
 

  
  


 

  

   




Template Sequence  RCVVLPEDLCHKFLQLAESNTVRGIETCG
Template Known Secondary structure 

TTTTT


Template Predicted Secondary structure 






Template SS confidence 




























   267..270.........280.........290.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions