Job Description P0C243 Confidence 27.55% Date Thu Jan 5 11:30:03 GMT 2012 Rank 14 Aligned Residues 72 % Identity 19% Template c2w7nA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:trfb transcriptional repressor protein; PDBTitle: crystal structure of kora bound to operator dna: insight2 into repressor cooperation in rp4 gene regulation Resolution 1.85 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.									.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query Sequence		T	R	G	D	V	R	H	I	A	Q	D	W	N	L	S	D	D	E	L	E	T	V	M	Q	R	L	D	D	.	.	.	.	.	.	.	A	F	E	Y	G	A	D	V	S	I	V	H	D	V	V	R	E	L	M	E	E	.	.	.	.	.	.	.	.	K	R	A	S	R	Q	V	T	V	P	A	V	M	L	E	K
Query Conservation																														.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	S	Q	F	Q	E	A	I	Q	G	L	E	V	G	Q	Q	T	I	E	I	A	R	G	V	L	V	D	G	K	P	Q	A	T	F	A	T	S	L	G	L	T	R	G	A	V	S	Q	A	V	H	R	V	W	A	A	F	E	D	K	N	L	P	E	G	Y	A	R	V	T	A	V	L	P	E	H	Q	A	Y	I
Template Known Secondary structure											T	T																T	T												T																				T				T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		94	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	A	L	A	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	K	W	E	A	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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