Return to main results Retrieve Phyre Job Id

Job DescriptionP64519
Confidence6.34%DateWed Jan 25 15:20:59 GMT 2012
Rank14Aligned Residues65
% Identity20%Templatec1dxyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:d-2-hydroxyisocaproate dehydrogenase; PDBTitle: structure of d-2-hydroxyisocaproate dehydrogenase
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20...... ...30.........40.........
Predicted Secondary structure 


...............................








Query SS confidence 

























. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .






















Query Sequence  MKTAKEYSDTAKREVSVDVDALLAAI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NEISESEVHRSQNDSEHVSVDGR
Query Conservation 






















 

...............................  


 
 
  
  
     
 
Alig confidence 














.









...............................


















..

Template Conservation 

 

 


 


 
.

  

  

  
 
 





   

              
    
    


 


 
..  
Template Sequence  MKPGAIVINTARPNL. IDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIA. . YY
Template Known Secondary structure  S
TT
S
TTS.B
TTSSS
TTSS


T
TT
SS
T..T
Template Predicted Secondary structure 










.





































..

Template SS confidence 















































































   223......230....... ..240.........250.........260.........270.........280.........290....... ..
 
   50.........60........
Predicted Secondary structure 
Query SS confidence 


















Query Sequence  EYHTWRELADAFELDIHDF
Query Conservation     
 


 
 




 
 
Alig confidence 


















Template Conservation 
 
           

   
Template Sequence  TETAVHNMVYFSLQHLVDF
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 


















   300.........310........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions