Return to main results Retrieve Phyre Job Id

Job DescriptionP30192
Confidence6.01%DateThu Jan 5 11:46:17 GMT 2012
Rank32Aligned Residues71
% Identity23%Templatec2vifA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:suppressor of cytokine signalling 6; PDBTitle: crystal structure of socs6 sh2 domain in complex with a c-kit2 phosphopeptide
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210.........220.........230.........240.........250.........260
Predicted Secondary structure 































Query SS confidence 







































































Query Sequence  ETVLAHSMLATIPDNSITLFDKLFYSEDLLLTLNQKGCNRHWLLPAWKNIASEMIELGNTASPGTIPKRLEH
Query Conservation 
  

  

  
    


 



 
  

      
   



 

 
    

        

  
    
Alig confidence 












































.

























Template Conservation 

  

 

     
 



 
        


     
 
  
 .                
 

  

  
Template Sequence  TRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIE. HSNGRFSFYEQPDVEGHTSIVDLIEH
Template Known Secondary structure 
TTTS
TT

SSTT
STT.TTTT

S


BSS
Template Predicted Secondary structure 















.









Template SS confidence 







































































   390.........400.........410.........420.........430.... .....440.........450.........460
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions