 |
Job Description | P30192 | Confidence | 2.73% | Date | Thu Jan 5 11:46:17 GMT 2012 |
Rank | 74 | Aligned Residues | 37 |
% Identity | 30% | Template | c2g29A_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:nitrate transport protein nrta; |
PDBTitle: crystal structure of the periplasmic nitrate-binding2 protein nrta from synechocystis pcc 6803
|
Resolution | 1.50 Å |
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | |
|
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | F | R | Q | T | A | Q | D | R | G | A | E | . |
. |
R | Y | L | K | D | D | W | H | G | L | Q | L | F | A | I | D | G | A | Q | F | R | T | P | D | K | P | E |
Query Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|
|
|
|   |   |   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |
|
|   |   |
|
| . |
|   |   |   |   |
Template Sequence |   |
L | W | R | E | A | A | Q | A | L | E | V | P | A | D | Q | I | P | S | S | P | S | R | G | I | E | T | F | . |
F | D | G | I | T | F | D | . |
P | E | N | P | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S |
|
|
| G | G | G | S |
| S | S | S |
|
|
|
|  |  | B | . | T | T | S |
|  |  |
| . | T | T |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
395 | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | |
. | . | . | . | . | . | . | |
. | 430 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|