 |
Job Description | P0A935 | Confidence | 14.15% | Date | Thu Jan 5 11:09:17 GMT 2012 |
Rank | 44 | Aligned Residues | 42 |
% Identity | 14% | Template | c3pvpA_ |
PDB info |
PDB header:dna binding protein/dna | Chain: A: PDB Molecule:chromosomal replication initiator protein dnaa; |
PDBTitle: structure of mycobacterium tuberculosis dnaa-dbd in complex with box22 dna
|
Resolution | 2.30 Å |
|
  |   |
204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | H | A | Y | R | S | I | G | K | V | L | I | D | R | G | E | V | K | K | E | D | M | S | M | Q | A | I | R | H | W | G | E | T | H | S | E | A | E | V | R | E | L | L | E | Q |
Query Conservation |   |
|
|   |
|
|   |
|
|
|
|   |
|
|   |   |
|   |
|   |   |   |   |   |
|
|
|   |
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|
|   |   |
| . |
|
|
|
| . |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |
|   | . | . |   |
|   |   |   |
|   |   |
Template Sequence |   |
T | D | L | S | L | P | K | I | G | Q | A | F | . |
G | R | D | H | . |
T | T | V | M | Y | A | Q | R | K | I | L | S | E | M | A | E | R | R | . |
. |
E | V | F | D | H | V | K | E |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  | T | . | T |
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
455 | . | . | . | . | 460 | . | . | . | . | . | . | |
. | . | . | 470 | |
. | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | |
|
. | 490 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|