 |
| Job Description | P0A935 | | Confidence | 7.25% | Date | Thu Jan 5 11:09:17 GMT 2012 |
| Rank | 96 | Aligned Residues | 30 |
| % Identity | 17% | Template | c3hefB_ |
| PDB info |
PDB header:viral protein | Chain: B: PDB Molecule:gene 1 protein; |
PDBTitle: crystal structure of the bacteriophage sf6 terminase small2 subunit
|
| Resolution | 1.65 Å |
|
|   |   |
218 | . | 220 | . | . | . | . | . | . | |
. | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | G | E | V | K | K | E | D | M | . |
S | M | Q | A | I | R | H | W | G | E | T | H | S | E | A | E | V | R | E | L | L | E | Q |
| Query Conservation |   |
  |
|   |
|   |   |   |   |   | . |
|
|
|   |
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|   |   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   | . | . |
|   |
|   |   |   |   |
| Template Sequence |   |
L | K | V | C | K | R | P | G | M | P | D | K | S | T | V | F | R | W | L | A | K | H | E | D | . |
. |
F | R | D | K | Y | A | K |
| Template Known Secondary structure |   |
 |  |  | T | T | S | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  | . | . |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  | . | . |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
. | . | . | . | 60 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|