Job Description P0A935 Confidence 100.00% Date Thu Jan 5 11:09:17 GMT 2012 Rank 4 Aligned Residues 289 % Identity 27% Template c3czbA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative transglycosylase; PDBTitle: crystal structure of putative transglycosylase from caulobacter2 crescentus Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		S	L	V	N	Q	P	D	A	V	G	A	P	I	N	A	G	D	F	A	E	Q	I	N	H	I	R	N	S	S	P	R	L	Y	G	N	Q	S	N	V	Y	N	A	V	Q	E	W	L	R	A	G	.	.	.	.	G	D	T	R	N	M	R	Q	F	G	I	D	A	W	Q	M	E	G	A	D	N	Y	G	N	V	Q
Query Conservation																																																				.	.	.	.
Alig confidence												.	.																					.	.																	.	.	.	.																	.	.	.
Template Conservation												.	.																					.	.																																					.	.	.
Template Sequence		A	A	L	S	F	A	G	L	A	G	.	.	W	A	E	E	D	H	L	A	A	L	N	A	F	R	A	G	C	G	V	S	.	.	K	D	P	A	A	A	R	V	C	G	L	A	K	A	T	K	D	L	D	V	S	G	A	K	A	F	I	E	A	N	F	R	V	E	A	V	.	.	.	D	G	G	G	D	G	L
Template Known Secondary structure				S	S	S	T	T		T	T	.	.	T	T	T	S														T	T		.	.			S																																	G	.	.	.	G	G	G
Template Predicted Secondary structure												.	.																					.	.																																					.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																											.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		F	T	G	Y	Y	T	P	V	I	Q	A	R	H	T	R	Q	G	E	F	Q	Y	P	I	Y	R	M	P	P	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	L	P	S	R	A	E	I	Y	A	G	A	L	S	D	K	Y	.	I	L	A	Y	S
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.				.
Template Conservation																																																																						.	.	.
Template Sequence		L	T	A	Y	F	A	P	Q	Y	E	A	R	M	S	R	N	A	E	F	S	A	P	L	R	G	L	P	A	D	L	V	V	L	D	L	G	P	F	E	P	A	L	V	G	K	K	I	T	G	H	V	E	G	S	T	F	V	P	Y	P	D	R	A	E	I	E	A	T	.	.	.	P	S	D	K	P	L	A	W	M
Template Known Secondary structure													B	S	S			S	S	S						B			T	T						S	T	T	T		G	G	G	T	T									T	T												T	T	S	.	.	.			S	S		S
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	L	M	D	N	F	I	M	D	V	Q	G	S	G	Y	I	D	F	G	D	G	S	P	L	N	F	F	S	Y	A	G	K	N	G	H	A	Y	R	S	I	G	K	V	L	I	D	R	G	E	V	K	K	E	D	M	S	M	Q	A	I	R	H	W	G	E	T	H	S	E	A	E	V	R	E	L	L	E	Q	N
Query Conservation
Alig confidence		.																										.																									.	.	.	.	.	.
Template Conservation		.																										.																									.	.	.	.	.	.
Template Sequence		.	R	P	E	E	L	F	F	L	Q	I	Q	G	S	G	V	L	V	L	P	D	G	R	R	V	R	.	A	V	F	A	G	T	N	G	K	P	F	V	G	I	A	I	A	M	R	D	K	G	L	L	.	.	.	.	.	.	A	D	A	I	R	T	W	L	A	E	H	R	G	P	E	A	D	A	I	M	R	L	N
Template Known Secondary structure		.												S							T	T						.														S						T	T	T			.	.	.	.	.	.											T	T	T								T	T
Template Predicted Secondary structure		.																										.																									.	.	.	.	.	.
Template SS confidence
			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.							.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		251	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.
Predicted Secondary structure											.	.																																																																			.
Query SS confidence											.	.																																																																			.
Query Sequence		P	S	F	V	F	F	K	P	Q	.	.	S	F	A	P	V	K	G	A	S	A	V	P	L	V	G	R	A	S	V	A	S	D	R	S	I	I	P	P	G	T	T	L	L	A	E	V	P	L	L	D	N	N	G	K	F	N	G	Q	Y	E	L	R	L	M	V	A	L	D	V	G	G	A	I	K	G	Q	.	H	F
Query Conservation											.	.																																																																			.
Alig confidence											.	.																																								.	.	.	.	.	.	.	.	.																			.
Template Conservation																																																				.	.	.	.	.	.	.	.	.
Template Sequence		P	R	Y	V	F	F	R	T	V	P	D	D	G	K	E	P	A	G	A	A	G	V	A	L	P	P	G	R	A	I	A	V	D	P	G	Y	H	A	Y	G	G	F	Y	W	L	D	A	A	F	P	.	.	.	.	.	.	.	.	.	V	Y	R	R	A	V	T	A	L	D	T	G	G	A	I	K	G	E	V	R	A
Template Known Secondary structure														S	S			B		T	T	S	S	B			T	T	S						T	T	T			T	T											.	.	.	.	.	.	.	.	.													T	T			S	S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.										.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	Y	Q	G	I	G	P	E	A	G	H	R	A	G	W	Y	N	H	Y	G	R	V	W	V	L	K	T	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	Y	M	G	S	G	A	V	A	G	V	E	A	G	R	V	R	H	T	L	R	L	Y	R	L	T	P	N	P
Template Known Secondary structure							S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions