Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAE2
Confidence4.68%DateThu Jan 5 11:12:41 GMT 2012
Rank20Aligned Residues402
% Identity12%Templated1pw4a_
SCOP infoMFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40 .........50.........60.........70.
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Query Sequence  ESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMA. . . . . . . . . . GPSVLLAYIIGGIAAYIIMRALGEMSVHNPA
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Template Conservation          
  
 
                      
     
 
    
 
 
       
     
 
 

 


  
Template Sequence  AEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL
Template Known Secondary structure  S

TSTTSSTT
SS
S
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   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   72.......80... ......90.........100.........110.........120.........130.........140.....
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Query Sequence  ASSFSRYAQENL. . . . . . GPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVF
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Template Conservation          
                         
                                             
Template Sequence  PAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLF
Template Known Secondary structure 
SSSSTTT
TTTTS
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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   146...150.........160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  GELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEA
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Template Sequence  LLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTA. . . . . . . . . . . . . . . . . . . . . . . . . . KQ
Template Known Secondary structure  T

STT
T


SSTTT


S
TTT




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   177..180.........190.........200.........210.........220........ .230
 
   226...230.........240.........250.........260.........270.........280.........290.........300.....
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Query Sequence  KDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGV
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Template Sequence  IFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLC. . . . . . . . . . . . . .
Template Known Secondary structure  TSS
BTTBS


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   244.....250.........260.........270.........280.........290.........300.........
 
   306...310.........320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  GRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRR
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Template Sequence  . . . . . . . . . . . . . . GWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALEL
Template Known Secondary structure  ..............TSTT
TTS

TT
TT
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   310.........320.........330.........340.........350.........360.........370.....
 
   386...390.........400.........410.........420.........430.........440.........450.......
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Query Sequence  LPPEEVKALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAENQ
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Template Conservation        
   
         
        
 
    
                                   
Template Sequence  APKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQ
Template Known Secondary structure  S
TTSS
SGGGG
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   376...380.........390.........400.........410.........420.........430.........440.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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