Return to main results Retrieve Phyre Job Id

Job DescriptionP16917
Confidence7.91%DateWed Jan 25 15:20:40 GMT 2012
Rank70Aligned Residues44
% Identity34%Templatec3qx3B_
PDB info PDB header:isomerase/dna/isomerase inhibitorChain: B: PDB Molecule:dna topoisomerase 2-beta; PDBTitle: human topoisomerase iibeta in complex with dna and etoposide
Resolution2.16 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1340.........1350.........1360.........1370.........1380.........1390...
Predicted Secondary structure 



























Query SS confidence 





















































Query Sequence  SAYHTHGADSHGEYWDEIFSGKDEKIVKSKDNNIKSFYLGTPSGNFKAIDNHGK
Query Conservation                                                        
Alig confidence 



.






...







.











.....












Template Conservation    

.


 


...







.










 .....  





  

 
Template Sequence  SAYH. HGEQALM. . . MTIVNLAQ. NFVGSNNINLLQ. . . . . PIGQFGTRLHGGK
Template Known Secondary structure  T

.S
...
.
STTS
SS
SB
.....
BS



TTTTTT
Template Predicted Secondary structure 



.

...
.





.....












Template SS confidence 





















































   771... .....780. ........ 790.........800. ........810....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions