Job Description P16917 Confidence 13.84% Date Wed Jan 25 15:20:40 GMT 2012 Rank 22 Aligned Residues 53 % Identity 21% Template c3hd4A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:nucleoprotein; PDBTitle: mhv nucleocapsid protein ntd Resolution 1.75 Å

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		1347	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.				.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380		.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410
Predicted Secondary structure																				.	.	.																	.
Query SS confidence																				.	.	.																	.
Query Sequence		A	D	S	H	G	E	Y	W	D	E	I	F	S	G	K	D	E	K	.	.	.	I	V	K	S	K	D	N	N	I	K	S	F	Y	L	G	T	.	P	S	G	N	F	K	A	I	D	N	H	G	K	E	I	T	N	R	K	G	L	P	N	V	C	R	V	H	G	N
Query Conservation																				.	.	.																	.
Alig confidence							.													.	.	.																	.							.	.	.	.	.	.	.	.	.	.
Template Conservation							.																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	Q	K	G	.	Y	W	Y	R	H	N	R	R	S	F	K	T	P	D	G	Q	Q	K	Q	L	L	P	R	W	Y	F	Y	Y	L	G	T	G	P	H	A	G	A	S	.	.	.	.	.	.	.	.	.	.	Y	G	D	S	I	E	G	V	F	W	V	A	N	S
Template Known Secondary structure		G	G				.							S						S	S	S														T	T		S	T	T	T	T			.	.	.	.	.	.	.	.	.	.	T	T				T	T							T
Template Predicted Secondary structure							.																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140											.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions