|   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
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. | . | . | . | . | . | 70 | . | . | . | |
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|
. | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  | . | . | . | . | . |  |  |
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|
| . | . | . | . | . |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
. |
. |
. |
. |
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| . |
. |
. |
. |
. |
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Query Sequence |   |
A | R | K | H | I | A | L | V | A | H | D | H | C | K | Q | M | L | M | S | W | V | E | R | H | Q | P | L | L | E | Q | H | V | L | Y | A | T | G | T | T | G | N | L | I | S | R | A | T | G | M | N | V | N | A | M | . |
. |
. |
. |
. |
L | S | G | P | M | G | G | D | Q | Q | . |
. |
. |
. |
. |
V | G | A | L | I | S |
Query Conservation |   |
  |   |   |   |
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|   |   |
|   |
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|   |   |
|   |   |   |   |   |
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|   |
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|   |
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|   |
|   |   |
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|   |
|   |   |   | . | . | . | . | . |   |
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|   |
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|   |
| . | . | . | . | . |
|   |   |   |
|   |
Alig confidence |   |
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| . | . |
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| . | . |
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| . |
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| . | . | . | . | . |
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| . | . | . | . | . |
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Template Conservation |   |
|   |
|   |
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| . | . |
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|   |   |
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|   |   |
|   |   |   | . | . |
|   |
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|   |
|   |
|   | . |
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|   |
|   |   |
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|   |
|   |
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|   |
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Template Sequence |   |
P | G | Q | L | A | L | F | S | V | S | D | . |
. |
K | T | G | L | V | E | F | A | R | N | L | T | A | L | . |
. |
G | L | N | L | V | A | S | G | G | T | A | K | A | L | R | D | A | . |
G | L | A | V | R | D | V | S | E | L | T | G | F | P | E | M | L | G | G | R | V | K | T | L | H | P | A | V | H | A | G | I | L |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
| S |
| . | . |
| T | T |  |  |  |  |  |  |  |  |  | T | T | . | . | T |
|  |  |  |  |
|  |  |  |  |  |  |  |  | T | T | . | T |
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|
|  |  |  |  |  |  |  | S |
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|
| B | T | T | T | T | B | S | S |
| S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
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|  |  |  |  |  |  |  |  |
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|  |  |
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|  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | |
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
  |   |
80 | |
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. | . | . | . | . | . | . | |
. | |
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. | 90 | . | . | . | . | . | . | . | |
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. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  | . |  | . | . | . |  |
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|
| . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
| . |
. |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
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Query Sequence |   |
E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | K | I | D | V | L | I | . |
F | . |
. |
. |
F | W | D | P | L | N | A | V | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
H | D | P | D | V | K | A | L | L | R | L | A | T | V | . |
. |
W | N | I | P | V | A | T | N | V | A | T | A | D | F | I | I | Q | S |
Query Conservation |   |
  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|   |
|
| . |
| . | . | . |
|   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|
|   |
|   |
|   |   | . | . |   |   |
|
|   |
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|   |
|
|
|   |   |
|
|   |
|
Alig confidence |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . |
| . | . | . |
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|
| . | . | . | . | . | . | . | . | . |
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|
| . | . |
|
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|
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|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
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|
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
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|
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|   |   |   |
|   |
|
|   |
|
|   |
|
|   |   |
|   |   |   |
Template Sequence |   |
A | R | N | I | P | E | D | N | A | D | M | A | R | L | D | F | N | L | I | R | V | V | A | C | N | L | Y | P | F | V | K | T | V | A | S | P | G | V | T | V | E | E | A | V | E | Q | I | D | I | G | G | V | T | L | L | R | A | A | A | K | N | H | A | R | V | T | V | V | C | E | P | E | D | Y | V | V | V | S | T | E |
Template Known Secondary structure |   |
|
| S | S |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | S | T | T |
|
|  |  |  |  |  |  | T |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|  |  |  |
|
| G | G | G |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
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|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
  |
  |   |
130 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
P | H | F | N | D | A |
Query Conservation |   |
  |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
Template Sequence |   |
M | Q | S | S | E | S |
Template Known Secondary structure |   |
 |  |  | S | T | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
158 | . | 160 | . | . | . |
  |