Return to main results Retrieve Phyre Job Id

Job DescriptionP0A731
Confidence31.62%DateThu Jan 5 11:04:39 GMT 2012
Rank84Aligned Residues91
% Identity16%Templatec3mc6C_
PDB info PDB header:lyaseChain: C: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of scdpl1
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70......... 80.........90.........100.........110.........120.........130..
Predicted Secondary structure 












.




















Query SS confidence 

























.




















































Query Sequence  RATGMNVNAMLSGPMGGDQQVGALIS. EGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVATADFIIQSPHF
Query Conservation 
  

 
    


 


 

   
 . 
 

 



 

     
  
  

 
 
    

 


 


  

 
 
 
Alig confidence 

























.




















































Template Conservation     
     

 
      
   
   
      
         
    
  
  

   
  
 

 
           
Template Sequence  YYFGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEK
Template Known Secondary structure  S


B
TTT
SB
TTTTGGG

SSTT
TTT



S
TTTTTTT

TTTTGGGTT
Template Predicted Secondary structure 
































Template SS confidence 















































































   276...280.........290.........300.........310.........320.........330.........340.........350.....
 
   133......140....
Predicted Secondary structure 









Query SS confidence 











Query Sequence  NDAVDILIPDYQ
Query Conservation          
   
Alig confidence 











Template Conservation              
Template Sequence  AGYKNLPLLDFR
Template Known Secondary structure  TT

S



STT
Template Predicted Secondary structure 











Template SS confidence 











   356...360.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions