Job Description P0A731 Confidence 37.66% Date Thu Jan 5 11:04:39 GMT 2012 Rank 67 Aligned Residues 92 % Identity 22% Template c1toaA_ PDB info PDB header:binding protein Chain: A: PDB Molecule:protein (periplasmic binding protein troa); PDBTitle: periplasmic zinc binding protein troa from treponema pallidum Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.																																.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.																																.	.	.	.	.	.
Query Sequence		D	H	C	K	Q	M	L	M	S	W	V	E	R	H	Q	P	L	L	E	Q	H	.	.	.	.	.	V	L	Y	A	T	G	T	T	G	N	L	I	S	R	A	T	G	M	N	V	N	A	M	L	S	G	P	M	G	G	D	.	.	.	.	.	.	Q	Q	V	G	A	L	I	S	E	G	K	I	D	V	L	I	F
Query Conservation																							.	.	.	.	.																																.	.	.	.	.	.
Alig confidence																							.	.	.	.	.																																.	.	.	.	.	.																	.
Template Conservation																																																																																	.
Template Sequence		Q	A	Y	Q	Q	Q	L	D	K	L	D	A	Y	V	R	R	K	A	Q	S	L	P	A	E	R	R	V	L	V	T	A	H	D	A	F	G	Y	F	S	R	A	Y	G	F	E	V	K	G	L	Q	G	V	S	T	A	S	E	A	S	A	H	D	M	Q	E	L	A	A	F	I	A	Q	R	K	L	P	A	I	F	.
Template Known Secondary structure																					T	S		G	G	G								S										T									S	S		S	S																	T	T		S				.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	W	D	P	L	N	A	V	P	H	D	P	D	V	K	A	L	L	R	L	A	T	V	W	N	I	P	V
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	I	E	S	S	I	P	H	K	N	V	E	A	L	R	D	A	V	Q	A	R	G	H	V	V
Template Known Secondary structure		.	.	.	.			T	T	S		T												T	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions