Job Description P45464 Confidence 71.58% Date Thu Jan 5 12:02:41 GMT 2012 Rank 139 Aligned Residues 173 % Identity 13% Template c3qdnA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin protein; PDBTitle: putative thioredoxin protein from salmonella typhimurium Resolution 2.09 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	Y	L	Q	Q	M	Q	Q	S	S	D	D	T	R	I	N	W	Q	L	L	A	I	R	A	L	V	K	E	G	K	T	G	Q	A	V	E	L	F	N	Q	L	P	Q	E	L	N	D	A	Q	R	R	E	K	T	L	L	A	V	E	I	K	L	A	Q	K	D	F	A	G	A	Q	N	L	L	A	K	I	T	P
Query Conservation
Alig confidence																																																										.	.
Template Conservation																																																										.	.
Template Sequence		E	E	A	I	R	A	L	L	D	K	V	L	P	R	E	E	E	L	K	A	Q	Q	A	X	Q	L	X	Q	E	G	N	Y	I	D	A	L	P	L	L	K	D	A	W	Q	L	S	S	Q	N	S	E	I	G	L	L	L	.	.	A	E	A	Q	I	A	L	N	R	S	E	E	A	E	A	V	L	K	T	I	P	L
Template Known Secondary structure											T	T	S																	T	T																T	T	S									.	.							T	T										T	T	S		G
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		A	D	L	E	Q	N	Q	Q	A	R	Y	W	Q	A	K	I	D	A	S	Q	G	R	P	S	I	D	L	L	R	A	L	I	A	Q	E	P	L	L	G	A	K	E	K	Q	Q	N	I	D	A	T	W	Q	A	L	S	S	M	T	Q	E	Q	A	.	.	.	.	N	T	L	V	I	N	A	D	E	N	I	L	Q	G
Query Conservation																																																																.	.	.	.
Alig confidence							.	.																																																								.	.	.	.
Template Conservation							.	.
Template Sequence		Q	D	Q	D	T	.	.	R	Y	Q	G	L	V	A	Q	I	E	L	L	K	Q	A	A	D	T	P	E	I	Q	Q	L	Q	Q	Q	V	A	D	N	P	Q	D	A	A	L	A	T	Q	L	A	L	Q	L	H	Q	V	G	R	N	E	E	A	L	E	L	L	F	S	H	L	R	K	D	L	T	A	A	E	G	Q	T
Template Known Secondary structure		G	G				.	.																T														S		T	T															T	T														T	T		T	T	T	T	T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		177	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	D	L	Q	R	V	W	F	D	N	R	N	D	P	D	M	M	K	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	T	F	Q	E	I	L	A	A	L	G	T	G	D	A	L	A	S	K	Y
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions