Job Description P45464 Confidence 35.34% Date Thu Jan 5 12:02:41 GMT 2012 Rank 172 Aligned Residues 114 % Identity 11% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		S	A	E	L	K	I	Y	D	T	S	S	Q	P	L	S	Q	I	L	S	Q	V	Q	Q	D	G	.	A	S	I	V	V	G	P	L	L	K	N	N	V	E	E	L	L	K	S	N	T	P	L	N	V	L	A	L	N	Q	P	E	N	I	E	N	R	V	N	I	C	Y	F	A	L	S	P	E	D	E	A	R	D	A
Query Conservation																											.
Alig confidence																											.							.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	N	I	T	P	I	Q	L	G	F	E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	.	.	.	A	G	S	N	G	A	Y	L	K	S	R	L	S	V	P	V	I	L	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	G	Y	D	V	L	Q	F
Template Known Secondary structure		T	S																					T	T				S					.	.	.										T	T		S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																	.	.	90	.	.	.	.	.	.
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	H	I	R	D	Q	G	K	Q	A	P	L	V	L	I	P	R	S	S	L	G	D	R	V	A	N	A	F	A	Q	E	W	Q	K	L	G	G	G	T	V	L	Q	Q	K	F	G	S	T	S	E	L	R	A	G	V	N	G	G	S	G
Query Conservation
Alig confidence																								.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		L	A	K	A	G	K	L	T	S	S	I	G	V	V	T	Y	Q	E	T	I	P	A	.	.	.	.	.	.	.	L	V	A	F	Q	K	T	F	N	L	R	L	D	Q	R	S	Y	I	T	E	E	D	A	R	G	Q	I	N	E	L	K	A
Template Known Secondary structure					T	T		T	T	S								S	S					.	.	.	.	.	.	.									T									S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions