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Job DescriptionP45464
Confidence96.72%DateThu Jan 5 12:02:41 GMT 2012
Rank86Aligned Residues143
% Identity13%Templatec2dgdD_
PDB info PDB header:lyaseChain: D: PDB Molecule:223aa long hypothetical arylmalonate decarboxylase; PDBTitle: crystal structure of st0656, a function unknown protein from2 sulfolobus tokodaii
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   366...370.........380... ......390.........400.........410.........420.........430.........440....
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Query Sequence  QPLSQILSQVQQDGASIV. VGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQA
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Template Sequence  EKELKYSYSLLAEVSDIIIYGRTYGTHKHAHVIKRVIKDVVIP. . . . . . . . . . . . . . . . . . . . . . EESVYELLKKLNVRK
Template Known Secondary structure  TTT
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TTTTT
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   53......60.........70.........80.........90..... ....100.........110
 
   445....450.........460.........470.........480..... ....490.........500.........510.......
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Query Sequence  PLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSEL. . . . . . . RAGVNGGSGIALTGSPITLRATTDSGMTTNNP
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Template Sequence  LWIGTP. . . YIKERTLEEVEWWRNKGFEIVGYDGLGKIRGIDISNTPIFTIYRLVKRHLN. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S...S
TTT




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   111..... ...120.........130.........140.........150.........160.......
 
   518.520.........530.........540.........550.........560.........570
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Query Sequence  TLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATLYASS
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Template Sequence  . . . . . . . . . . . . . EVLKADAVYIACTALSTYEAVQYLHEDL. . . . DXPVVSEN
Template Known Secondary structure  .............TTSS

TTS

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   168.170.........180.........190..... ....200...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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