Job Description P45464 Confidence 86.69% Date Thu Jan 5 12:02:41 GMT 2012 Rank 116 Aligned Residues 141 % Identity 13% Template c2dbaA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:smooth muscle cell associated protein-1, isoform PDBTitle: the solution structure of the tetratrico peptide repeat of2 human smooth muscle cell associated protein-1, isoform 2 Resolution UNK

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		G	C	G	T	H	T	P	D	Q	S	T	A	Y	M	Q	G	T	A	Q	A	D	S	A	F	Y	L	Q	Q	M	Q	Q	S	S	D	D	T	R	I	N	W	Q	L	L	A	I	R	A	L	V	K	E	G	K	T	G	Q	A	V	E	L	F	N	Q	L	P	Q	E	.	L	N	D	A	Q	R	R	E	K	T	L	L
Query Conservation																																																																					.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation																					.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	S	G	S	S	G	M	T	V	S	G	P	G	T	P	E	P	R	.	.	.	.	.	.	.	.	.	.	P	A	T	P	G	A	S	S	V	E	Q	L	R	K	E	G	N	E	L	F	K	C	G	D	Y	G	G	A	L	A	A	Y	T	Q	A	L	G	L	D	A	T	P	Q	D	Q	A	V	L	H	R	N
Template Known Secondary structure																					.	.	.	.	.	.	.	.	.	.				T	T																T	T	T														T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.											20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	I	K	L	A	Q	K	D	F	A	G	A	Q	N	L	L	A	K	I	T	P	A	D	L	E	Q	N	Q	Q	A	R	Y	W	Q	A	K	I	D	A	S	Q	G	R	P	S	I	D	L	L	R	A	L	I	A	Q	E	P	L	L	G	A	K	E	K	Q	Q	N	I	D	A	T
Query Conservation
Alig confidence																													.
Template Conservation																													.
Template Sequence		R	A	A	C	H	L	K	L	E	D	Y	D	K	A	E	T	E	A	S	K	A	I	E	K	D	G	G	.	D	V	K	A	L	Y	R	R	S	Q	A	L	E	K	L	G	R	L	D	Q	A	V	L	D	L	Q	R	C	V	S	L	E	P	K	N	K	V	F	Q	E	A	L	R	N	I
Template Known Secondary structure									T	T																T	S		.																T																	S	S
Template Predicted Secondary structure																													.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions