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Job DescriptionP45464
Confidence100.00%DateThu Jan 5 12:02:41 GMT 2012
Rank21Aligned Residues330
% Identity11%Templatec1yk1B_
PDB info PDB header:hormone/growth factor receptorChain: B: PDB Molecule:atrial natriuretic peptide clearance receptor; PDBTitle: structure of natriuretic peptide receptor-c complexed with brain2 natriuretic peptide
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   253......260.........270.........280.........290.........300.........310.........320.........330..
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Query Sequence  PASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQASVSDLTGEQPA
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Template Sequence  PPQKIEVLVLLPQDDSYLFSLTRVRPAIEYALRSVE. GLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAARG. . . . . . . .
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SSTTSTT

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   4.....10.........20.........30......... 40.........50.........60.........70....
 
   333......340.........350.........360.........370.........380.........390....... ..400.........410
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Query Sequence  AQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLK. . SNTPLNVLALNQP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AKPDLILGPVCEYAAAPVARLASHWDLPMLSAGAL
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S


STT

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   81........90.........100.........110.....
 
   411.. ......420.........430.........440.........450.........460......... 470.........480..
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Query Sequence  ENI. . . . . ENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKL. . . GGGTVLQQKFGST
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Template Sequence  AAGFQHKDSEYSHLTRVAPAYAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETK
Template Known Secondary structure  SSGGG
TTTTTTT
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   116...120.........130.........140.........150.........160.........170.........180.........190.....
 
   483......490.........500.........510.........520.........530.........540.........550.........560..
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Query Sequence  SELRAGVNGGSGIALTGSPITLRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQS
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Template Sequence  DLDLEDIVRNIQASE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RVVIMCASSDTIRSIMLVAHRHGMTSG
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   196...200.........210 .........220.........230.......
 
   563......570.... .....580.........590.........600.........610..... .... 620..
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Query Sequence  GATLYASSRSAQ. . . . . . . . . . . GTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDY. . . . . . . SLAR. . MYA
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Template Sequence  DYAFFNIELFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTVK. . . PEFEKFSMEVKSSVEKQGLNMEDYVNMFVE
Template Known Secondary structure  TS

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   238.240.........250.........260.........270.........280.... .....290.........300.........310....
 
   623......630...... ...640.........650.........660.........670 .......
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Query Sequence  MGVDAWSLANHFSQ. . . . . . . . . . . . . . . MRQVQGFEINGNTGSLTANPDCVINRNLSWLQYQ. . . QGQVVPV
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Template Sequence  GFHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIAMTDVEAGTQEVI
Template Known Secondary structure  TTTT

TT
SS
SSS
TTSBB

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TTT

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   315....320.........330.........340.........350.........360.........370.........380.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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