Job Description P45464 Confidence 20.00% Date Thu Jan 5 12:02:41 GMT 2012 Rank 200 Aligned Residues 168 % Identity 15% Template c1fchB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:peroxisomal targeting signal 1 receptor; PDBTitle: crystal structure of the pts1 complexed to the tpr region2 of human pex5 Resolution 2.20 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		L	L	A	I	R	A	L	V	K	E	G	K	T	G	Q	A	V	E	L	F	N	Q	L	P	Q	E	L	N	D	A	Q	R	R	E	K	T	L	L	A	V	E	I	K	L	A	Q	K	D	F	A	G	A	Q	N	L	L	.	A	K	I	T	P	A	D	L	E	Q	N	Q	Q	A	R	Y	W	Q	A	K	I	D	A
Query Conservation																																																										.
Alig confidence																																.	.																									.
Template Conservation																																.	.
Template Sequence		F	E	E	G	L	R	R	L	Q	E	G	D	L	P	N	A	V	L	L	F	E	A	A	V	Q	Q	D	P	K	H	.	.	M	E	A	W	Q	Y	L	G	T	T	Q	A	E	N	E	Q	E	L	L	A	I	S	A	L	R	R	C	L	E	L	K	P	D	N	Q	T	A	L	M	A	L	A	V	S	F	T	N	E
Template Known Secondary structure											T	T																	T	T		.	.														T	T																	T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		S	Q	G	R	P	S	I	D	L	L	R	A	L	I	A	Q	E	P	L	L	G	A	K	E	K	.	Q	Q	N	I	D	A	T	W	Q	A	L	S	S	M	T	Q	E	Q	A	N	T	L	V	I	N	A	D	E	N	I	L	Q	G	W	L	D	L	Q	R	V	W	F	D	N	R	N	D	P	D	M	M	K	A	G
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		S	L	Q	R	Q	A	C	E	I	L	R	D	W	L	R	Y	T	P	A	Y	A	H	L	V	T	P	R	I	L	G	S	L	L	S	D	S	L	F	L	E	V	K	E	L	F	L	A	A	V	R	L	D	P	T	S	I	D	P	D	V	Q	C	G	L	G	V	L	F	N	L	S	G	E	Y	D	K	A	V	D	C
Template Known Secondary structure		T															T	S	T	T	T	G	G	G	S					S																								T	T	S																	T
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	D	W	Q	K	R	Y	P	N	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	A	A	L	S	V	R	P	N	D	Y
Template Known Secondary structure							T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		474	.	.	.	.	.	480	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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