 |
Job Description | P37028 | Confidence | 45.37% | Date | Thu Jan 5 11:54:36 GMT 2012 |
Rank | 58 | Aligned Residues | 88 |
% Identity | 17% | Template | d1pjca2 |
SCOP info | Flavodoxin-like
| Formate/glycerate dehydrogenase catalytic domain-like
| L-alanine dehydrogenase-like
|
Resolution | 2.00 |
|
 |
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
. | . | . | . | . | 50 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  | . | . | . |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | A | A | P | R | V | I | T | L | S | P | A | N | T | E | L | A | F | A | A | G | I | T | P | . |
. |
. |
V | G | V | S | S | Y | S | D | Y | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | Q | A | Q | K | I | E | Q | V | S | T | W | Q | G | M | N | L | E | R | I | V | A | L | K | P | D | L | V |
Query Conservation |   |
  |   |
|   |
|
|
|
|
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |   | . | . | . |
|
|   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|
|   |
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|
|
Template Sequence |   |
K | N | Q | E | F | R | V | G | L | S | P | S | S | V | R | T | L | V | E | A | G | H | T | V | F | I | E | T | Q | A | G | I | G | A | G | F | A | D | Q | D | Y | V | Q | A | G | A | Q | V | V | P | S | A | K | D | A | W | S | R | E | M | V | V | K | V | K | E | P | L | P | A | E | Y | D | L | M | Q | K | D | Q | L |
Template Known Secondary structure |   |
S | T | T |
|
|
|
| S |
|
|  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  | T | T | T | T | G | G | G | T |
|
|  |  |  |  |  |  |  | T |
|  |  |  | S | S |  |  |  |  |  | T | S | S |  |  |  |
| S | S |
|
|
| G | G | G | G | G | G |
|
| T | T |
|  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
  |   |
83 | . | . | . | . | . | |
|
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | W | R | G | G | . |
. |
N | A | E | R | Q | V | D | Q | L | A | S | L | G | I | K | V | M | W | V | D |
Query Conservation |   |
|   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |
|
Template Sequence |   |
L | F | T | Y | L | H | L | A | A | A | R | E | L | T | E | Q | L | M | R | V | G | L | T | A | I | A | Y | E |
Template Known Secondary structure |   |
 |  |  |
|
|
| G | G | G |
|  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|