Job Description P37028 Confidence 64.64% Date Thu Jan 5 11:54:36 GMT 2012 Rank 35 Aligned Residues 170 % Identity 16% Template c3mfqB_ PDB info PDB header:metal binding protein Chain: B: PDB Molecule:high-affinity zinc uptake system protein znua; PDBTitle: a glance into the metal binding specificity of troa: where elaborate2 behaviors occur in the active center Resolution 2.60 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		A	A	P	R	V	I	T	L	S	P	A	N	T	E	L	A	F	A	A	G	I	T	P	V	G	V	S	S	Y	S	D	Y	P	P	Q	A	Q	K	I	E	Q	V	S	T	W	Q	G	M	N	L	E	R	I	V	A	.	L	K	P	D	L	V	I	A	W	R	G	G	N	A	E	R	Q	V	D	Q	L	A	S	L
Query Conservation																																																									.
Alig confidence																													.	.										.	.	.	.	.													.
Template Conservation																													.	.										.	.	.	.	.
Template Sequence		S	K	P	R	V	A	V	T	T	S	F	L	N	D	M	V	Y	Q	L	A	G	D	E	V	E	R	D	.	.	L	L	I	P	A	G	E	D	P	.	.	.	.	.	H	L	Y	V	A	K	S	S	D	L	S	K	L	Q	K	A	D	L	V	L	Y	H	G	L	H	F	E	G	K	M	V	E	A	L	E	K	T
Template Known Secondary structure									S	S												T	T	S	S				.	.		S	S		T	T	S		T	.	.	.	.	.	T	T															S							T	T	S	S		S
Template Predicted Secondary structure																													.	.										.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		101	.	.	.	.	.	.																		.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.										.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.																			.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.																			.	.	.	.	.	.	.	.	.
Query Sequence		G	I	K	V	M	W	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	T	.	.	.	S	I	E	Q	I	A	N	A	L	R	Q	L	A	P	W	S	P	Q	.	.	.	.	.	.	.	.	.	P	D	K	A	E	Q	A	A	Q	S	L	L	D	Q	Y	A	Q	L	K	A	Q	Y	A
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.																			.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	A	V	S	K	N	F	N	A	K	D	L	N	T	M	D	E	D	G	E	E	I	V	D	P	H	F	W	F	S	I	P	L	Y	K	S	A	V	A	V	A	S	E	E	L	Q	K	L	L	P	A	K	A	E	M	I	Q	K	N	T	E	K	Y	Q	A	Q	L	D	D	L	H	A	W	V	E	K	E	L	S
Template Known Secondary structure					T	T	T	T			G	G	G						S	S	S	S							G	G	G	S																				G	G	G																											T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	P	K	K	R	V	F	L	Q	F	G	I	N	P	P	F	T	S	G	K	E	S	I	Q	N	Q	V	L	E	V	C	G	G	E	N	I	F	K	D	S	R	V	P	W	P	Q	V	S	R	E	Q	V	L	A	R
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.
Template Sequence		V	I	P	K	E	S	R	Y	L	V	T	P	H	D	A	F	.	.	.	.	.	.	.	.	.	N	Y	F	A	A	S	Y	D	F	T	L	Y	A	P	Q	G	V	S	T	D	S	E	V	A	N	S	D	M	I	E	T
Template Known Secondary structure		T	S		S	T	T						S	S	S			.	.	.	.	.	.	.	.	.							T	T						S	S		S	S	S		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200										.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions