Job Description P37028 Confidence 100.00% Date Thu Jan 5 11:54:36 GMT 2012 Rank 2 Aligned Residues 241 % Identity 22% Template c3md9A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hemin-binding periplasmic protein hmut; PDBTitle: structure of apo form of a periplasmic heme binding protein Resolution 1.50 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		A	P	R	V	I	T	L	S	P	A	N	T	E	L	A	F	A	A	G	I	T	P	.	.	V	G	V	S	S	Y	S	D	Y	P	P	Q	A	Q	K	I	E	Q	V	S	T	W	Q	G	M	N	L	E	R	I	V	A	L	K	P	D	L	V	I	A	W	R	G	G	N	A	E	R	Q	V	D	Q	L	A	S	L
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		A	E	R	I	V	T	I	G	G	D	V	T	E	I	A	Y	A	L	G	A	G	D	E	I	V	A	R	D	S	T	S	Q	Q	P	Q	A	A	Q	K	L	P	D	V	G	Y	M	R	T	L	N	A	E	G	I	L	A	M	K	P	T	M	L	L	V	S	E	L	A	Q	P	S	L	V	L	T	Q	I	A	S	S
Template Known Secondary structure									S										T	T		G	G	G						T	T				S	G	G	G	G	G	S		B				T	T	S								T	T			S						T	T		S											T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		101	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		G	I	K	V	M	W	V	D	.	A	T	S	I	E	Q	I	A	N	A	L	R	Q	L	A	P	W	S	P	Q	P	D	K	A	E	Q	A	A	Q	S	L	L	D	Q	Y	A	Q	L	K	A	Q	Y	A	D	K	P	K	K	R	V	F	L	Q	F	G	I	N	P	P	F	T	S	G	K	E	S	I	Q	N	Q	V
Query Conservation										.
Alig confidence										.																																															.
Template Conservation																																																									.
Template Sequence		G	V	N	V	V	T	V	P	G	Q	T	T	P	E	S	V	A	M	K	I	N	A	V	A	T	A	L	H	Q	T	E	K	G	Q	K	L	I	E	D	Y	Q	Q	R	L	A	A	V	N	K	T	P	L	P	V	K	.	V	L	F	V	M	S	H	G	G	L	T	P	M	A	A	G	Q	N	T	A	A	D	A	M
Template Known Secondary structure		T											S																T																		T	S			S			S			.								S	S	S							B	S	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.										220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.
Query Sequence		L	E	V	C	G	G	E	N	I	F	K	D	S	R	V	P	W	P	Q	V	S	R	E	Q	V	L	A	R	S	P	Q	A	I	V	I	T	G	G	P	D	.	.	.	.	.	.	.	.	.	Q	I	P	K	I	K	Q	Y	W	G	E	Q	L	K	I	P	V	I	P	L	T	S	D	W	F	E	R	A	S	P	R
Query Conservation																																										.	.	.	.	.	.	.	.	.
Alig confidence																	.																									.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		I	R	A	A	G	G	S	N	A	M	Q	G	F	S	R	.	Y	R	P	L	S	Q	E	G	V	I	A	S	A	P	D	L	L	L	I	T	T	D	G	V	K	A	L	G	S	S	E	N	I	W	K	L	P	G	M	A	L	T	P	A	G	K	H	K	R	L	L	V	V	D	D	M	A	L	L	G	F	G	L	E
Template Known Secondary structure					T	T				S			S		B	S	.															S													S	S	G	G	G	G	G	G	S	T	T	G	G	G	S					T	T												S		S	T	T
Template Predicted Secondary structure																	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	L	A	A	Q	Q	L	C	N	A	L	S	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	Q	V	L	A	Q	L	R	E	K	M	E	Q	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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