Job Description P37028 Confidence 100.00% Date Thu Jan 5 11:54:36 GMT 2012 Rank 9 Aligned Residues 244 % Identity 13% Template c3gfvA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:uncharacterized abc transporter solute-binding PDBTitle: crystal structure of petrobactin-binding protein yclq from2 bacillu subtilis Resolution 1.75 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																										.	.									.	.	.	.
Query SS confidence																										.	.									.	.	.	.
Query Sequence		N	A	A	P	R	V	I	T	L	S	P	A	N	T	E	L	A	F	A	A	G	I	T	P	.	.	V	G	V	S	S	Y	S	D	.	.	.	.	Y	P	P	Q	A	Q	K	I	E	Q	V	S	T	W	Q	G	M	N	L	E	R	I	V	A	L	K	P	D	L	V	I	A	W	R	G	G	N	A	E	R	Q	V
Query Conservation																										.	.									.	.	.	.
Alig confidence																										.	.									.	.	.	.																																			.	.
Template Conservation																																																																										.	.
Template Sequence		K	N	P	K	K	V	V	V	F	D	F	G	S	L	D	T	L	D	K	L	G	L	D	D	I	V	A	G	L	P	K	Q	V	L	P	K	Y	L	S	K	F	K	D	D	K	Y	A	D	V	G	S	L	K	E	P	D	F	D	K	V	A	E	L	D	P	D	L	I	I	I	S	A	.	.	R	Q	S	E	S	Y
Template Known Secondary structure		S	S		S																T	T		G	G	G							S	S			G	G	G	G	G	G	G	S	T	T	S				B		S	S	S	B								T			S						G	.	.	G	G	G	G	G
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		D	Q	L	A	S	L	G	I	K	V	M	W	V	D	A	T	S	.	.	I	E	Q	I	A	N	A	L	R	Q	L	A	P	W	S	P	Q	P	D	K	A	E	Q	A	A	Q	S	L	L	D	Q	Y	A	Q	L	K	A	Q	Y	A	D	K	P	K	K	R	V	F	L	Q	F	G	I	N	P	P	F	T	S	G	K
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		K	E	F	S	K	I	A	P	T	I	Y	L	G	V	D	T	A	K	Y	X	E	S	F	K	S	D	A	E	T	I	G	K	I	F	D	K	E	D	K	V	K	D	E	L	A	N	I	D	H	S	I	A	D	V	K	K	T	A	E	K	L	N	K	N	G	L	V	I	X	A	N	D	G	K	I	S	A	F	G	P
Template Known Secondary structure								S									G	G	G																T	T																											T										T	T							T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.												.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	I	Q	N	Q	V	L	E	V	C	G	G	E	N	I	F	K	D	S	R	.	.	V	P	W	P	Q	V	S	R	E	Q	V	L	A	R	S	P	Q	A	I	V	I	T	G	G	P	D	Q	I	.	.	.	.	.	.	.	.	.	.	.	P	K	I	K	Q	Y	W	G	E	Q	L	K	I	P	V	I	P	L
Query Conservation																							.	.																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	R	Y	G	L	I	H	D	V	F	G	V	A	P	A	D	Q	N	I	K	A	S	T	H	G	Q	S	V	S	Y	E	Y	I	S	K	T	N	P	D	Y	L	F	V	I	D	R	G	T	A	I	G	E	T	S	S	T	K	Q	V	V	E	N	D	Y	V	K	N	V	N	A	V	K	N	G	H	V	I	Y	L
Template Known Secondary structure		T	S	T	T	T					T	T					S		T	T					S	S															S												T	S									T		G	G	G	T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		T	S	D	W	F	E	R	A	S	P	R	I	I	.	.	.	L	A	A	Q	Q	L	C	N	A	L	S	Q	V	D
Query Conservation															.	.	.
Alig confidence															.	.	.
Template Conservation
Template Sequence		D	S	A	T	W	Y	L	S	G	G	G	L	E	S	X	T	Q	X	I	K	E	V	K	D	G	L	E	K	E	N
Template Known Secondary structure											S	S																	S
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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