Job Description P37028 Confidence 100.00% Date Thu Jan 5 11:54:36 GMT 2012 Rank 12 Aligned Residues 238 % Identity 17% Template c3g9qA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ferrichrome-binding protein; PDBTitle: crystal structure of the fhud fold-family bsu3320, a periplasmic2 binding protein component of a fep/fec-like ferrichrome abc3 transporter from bacillus subtilis. northeast structural genomics4 consortium target sr577a Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		N	A	A	P	R	V	I	T	L	S	P	A	N	T	E	L	A	F	A	A	G	I	T	P	V	G	V	S	S	Y	S	D	Y	P	P	Q	A	.	.	.	.	Q	K	I	E	Q	V	S	T	W	Q	G	M	N	L	E	R	I	V	A	L	K	P	D	L	V	I	A	W	R	G	G	N	A	E	R	Q	V	D	Q
Query Conservation																																							.	.	.	.
Alig confidence																																							.	.	.	.									.	.																				.	.	.	.
Template Conservation																																																			.	.																				.	.	.	.
Template Sequence		K	H	P	K	R	V	V	V	X	A	D	G	Y	Y	G	Y	F	K	T	L	G	I	N	V	V	G	A	P	E	N	V	F	K	N	P	Y	Y	K	G	K	T	N	G	V	E	N	I	G	D	.	.	G	T	S	V	E	K	V	I	D	L	N	P	D	L	I	I	V	W	T	.	.	.	.	T	A	D	I	K	K
Template Known Secondary structure		S	S		S							G	G	G								T								G	G	G	G	T		T	T	T	T	T	T			T	T		B				.	.	S								T	T			S							.	.	.	.
Template Predicted Secondary structure																																																			.	.																				.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		L	A	S	L	G	I	K	V	M	W	V	D	A	T	S	I	E	Q	I	A	N	A	L	R	Q	L	A	P	W	S	P	Q	P	D	K	A	E	Q	A	A	Q	S	L	L	D	Q	Y	A	Q	L	K	A	Q	Y	A	D	.	.	K	P	K	K	R	V	F	L	Q	F	G	I	N	P	P	F	T	S	G	K	E	S
Query Conservation																																																										.	.
Alig confidence																.	.																																									.	.
Template Conservation																.	.
Template Sequence		L	E	K	I	A	P	T	V	A	V	K	Y	D	K	.	.	L	D	N	I	E	Q	L	K	E	F	A	K	X	T	G	T	E	D	K	A	E	K	W	L	A	K	W	D	K	K	V	A	A	A	K	T	K	I	K	K	A	V	G	D	K	T	I	S	I	X	Q	T	N	G	K	D	I	Y	V	F	G	K	D	F
Template Known Secondary structure						S							T	T		.	.	S		S	S											T																												T	T		B								T	T							S	S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.									.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.																																			.	.	.
Query SS confidence													.	.	.	.	.	.	.	.																																			.	.	.
Query Sequence		I	Q	N	Q	V	L	E	V	C	G	G	.	.	.	.	.	.	.	.	E	N	I	F	K	D	S	R	V	P	W	P	Q	V	S	R	E	Q	V	L	A	R	S	P	Q	A	I	V	I	T	G	G	P	D	.	.	.	Q	I	P	K	I	K	Q	Y	W	G	E	Q	L	K	I	P	V	I	P	L	T	S	D	W
Query Conservation													.	.	.	.	.	.	.	.																																			.	.	.
Alig confidence													.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation
Template Sequence		G	R	G	G	S	I	I	Y	K	D	L	G	L	Q	A	T	K	L	T	K	E	K	A	I	D	Q	G	P	G	Y	T	S	I	S	L	E	K	L	P	D	F	A	G	D	Y	I	F	A	G	P	W	Q	S	G	G	V	F	E	S	S	I	W	K	N	L	N	A	V	K	N	G	H	V	Y	K	X	D	P	I	G
Template Known Secondary structure		S	T	T						T	T	S			B										T	T	T	S	S	S						T	T	S							S							S					T	T	T	S					T	S					T	T							T	T	G
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		F	E	R	A	S	P	R	I	I	L	A	.	A	Q	Q	L	C	N	A	L	S	Q	V	D
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		F	Y	F	T	D	P	I	S	L	E	G	Q	L	E	F	I	T	E	S	L	T	K	L	E
Template Known Secondary structure		G	G			S																	S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions