Job Description P37028 Confidence 100.00% Date Thu Jan 5 11:54:36 GMT 2012 Rank 8 Aligned Residues 242 % Identity 19% Template c3eiwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:htsa protein; PDBTitle: crystal structure of staphylococcus aureus lipoprotein, htsa Resolution 1.60 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.
Query Sequence		N	A	A	P	R	V	I	T	L	S	P	A	N	T	E	L	A	F	A	A	G	I	T	P	V	G	V	S	S	Y	S	D	Y	P	P	.	.	.	.	.	.	.	Q	A	Q	K	I	E	Q	V	S	T	W	Q	G	M	N	L	E	R	I	V	A	L	K	P	D	L	V	I	A	W	R	G	G	N	A	E	R	Q
Query Conservation																																					.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.																																			.
Template Conservation																																																																														.
Template Sequence		K	D	A	K	R	I	V	V	L	E	Y	S	F	A	D	A	L	A	A	L	D	V	K	P	V	G	I	A	D	D	G	K	K	K	R	I	I	K	P	V	R	E	K	I	G	D	Y	T	S	V	G	T	R	K	Q	P	N	L	E	E	I	S	K	L	K	P	D	L	I	I	A	D	S	S	R	H	.	K	G	I
Template Known Secondary structure		T	T							S	S										T	T				S					T	T		G	G	G	S										S					B		S	S	S	B								T			S						T	T	T	T	.	T	T	T
Template Predicted Secondary structure																																																																														.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																			.																																																			.
Query SS confidence																			.																																																			.
Query Sequence		V	D	Q	L	A	S	L	G	I	K	V	M	W	V	D	A	T	.	S	I	E	Q	I	A	N	A	L	R	Q	L	A	P	W	S	P	Q	P	D	K	A	E	Q	A	A	Q	S	L	L	D	Q	Y	A	Q	L	K	A	Q	Y	A	D	K	P	K	K	R	V	F	L	.	Q	F	G	I	N	P	P	F	T	S	G
Query Conservation																			.																																																			.
Alig confidence																			.																																																			.
Template Conservation
Template Sequence		N	K	E	L	N	K	I	A	P	T	L	S	L	K	S	F	D	G	D	Y	K	Q	N	I	N	S	F	K	T	I	A	K	A	L	N	K	E	K	E	G	E	K	R	L	A	E	H	D	K	L	I	N	K	Y	K	D	E	I	K	F	D	R	N	Q	K	V	L	P	A	V	V	A	K	A	G	L	L	A	H	P
Template Known Secondary structure									S							S	T	T																	T	T																									S		T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.										.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.											220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	S	I	Q	N	Q	V	L	E	V	C	G	G	E	N	I	F	K	D	.	.	.	.	.	.	.	.	.	S	R	V	P	W	P	Q	V	S	R	E	Q	V	L	A	R	S	P	Q	A	I	V	I	T	G	G	P	D	.	.	.	.	.	.	.	.	.	.	Q	I	P	K	I	K	Q	Y	W	G	E	Q	L
Query Conservation																						.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	S	Y	V	G	Q	F	L	N	E	L	G	F	K	N	A	L	S	D	D	V	T	K	G	L	S	K	Y	L	K	G	P	Y	L	Q	L	D	T	E	H	L	A	D	L	N	P	E	R	M	I	I	M	T	D	H	A	K	K	D	S	A	E	F	K	K	L	Q	E	D	A	T	W	K	K	L	N	A	V	K
Template Known Secondary structure		T	T	S									T	T			B	S	S							T	T	G	G	G			T	T															S							G	G	G																		T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	P	V	I	P	L	T	S	D	W	F	E	R	A	S	P	R	I	I	L	A	A	Q	Q	L	C	N	A	L	S	Q	V
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		N	N	R	V	D	I	V	D	R	D	V	W	A	.	.	R	S	R	G	L	I	S	S	E	E	M	A	K	E	L	V	E	L
Template Known Secondary structure		T	T											T	.	.	T	T		S
Template Predicted Secondary structure															.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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