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Job Description | P37028 | Confidence | 27.91% | Date | Thu Jan 5 11:54:36 GMT 2012 |
Rank | 81 | Aligned Residues | 97 |
% Identity | 14% | Template | c3e18A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:oxidoreductase; |
PDBTitle: crystal structure of nad-binding protein from listeria innocua
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Resolution | 1.95 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
V | I | T | L | S | P | A | N | T | E | L | A | F | A | A | . |
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G | I | T | P | V | G | V | S | S | Y | S | D | Y | P | P | Q | A | Q | K | I | E | Q | V | S | T | W | Q | G | M | N | L | E | R | I | V | A | . |
L | K | P | D | L | V | I | A | W | R | G | G | N | A | E | . |
R | Q | V | D | Q | L | A | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | V | G | Y | G | G | M | G | S | Y | H | V | T | L | A | S | A | A | D | N | L | E | V | H | G | V | F | . |
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D | I | L | A | E | K | R | E | A | A | A | Q | K | G | L | K | I | Y | E | S | Y | E | A | V | L | A | D | E | K | V | D | A | V | L | I | A | T | P | N | D | S | H | K | E | L | A | I | S | A | L | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
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100 | . | . | . | . | . | . | . | . | . | |
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110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | G | I | K | V | M | W | V | D | A | . |
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T | S | I | E | Q | I | A | N | A | L | R | Q | L | A | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | G | K | H | V | V | C | E | K | P | V | T | M | T | S | E | D | L | L | A | I | M | D | V | A | K | R |
Template Known Secondary structure |   |
T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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