Job Description P37028 Confidence 68.42% Date Thu Jan 5 11:54:36 GMT 2012 Rank 33 Aligned Residues 209 % Identity 13% Template c2xdqB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex Resolution 2.40 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		E	L	A	F	A	A	G	I	T	P	V	G	V	S	S	Y	S	D	Y	P	P	Q	A	Q	K	I	E	Q	V	S	T	W	Q	G	M	N	L	E	R	I	V	A	L	K	P	D	L	V	I	A	W	R	G	G	N	A	E	R	Q	V	D	Q	L	A	S	L	.	G	I	K	V	M	W	V	D	A	T	S	I	E
Query Conservation																																																																				.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	M	A	D	L	G	I	Q	V	N	L	V	I	P	A	A	A	T	V	H	D	L	Q	R	L	P	Q	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	L	V	P	Y	R	E	I	G	G	L	T	A	Q	Y	L	E	R	E	F	G	Q	P	S	V	R	I	T	P	M	G	V	V
Template Known Secondary structure								T									T	T			T	T	T	G	G	G	G	G	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S	S																						S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																				.	.	.																						.	.	.	.	.
Query SS confidence																				.	.	.																						.	.	.	.	.
Query Sequence		Q	I	A	N	A	L	R	Q	L	A	P	W	S	P	Q	P	D	K	.	.	.	A	E	Q	A	A	Q	S	L	L	D	Q	Y	A	Q	L	K	A	Q	Y	A	D	.	.	.	.	.	K	P	K	K	R	V	F	L	Q	F	G	I	N	P	P	F	T	S	G	K	E	S	I	Q	N	Q	V	L	E	V	C	G	G
Query Conservation																				.	.	.																						.	.	.	.	.
Alig confidence																				.	.	.																						.	.	.	.	.																	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.
Template Sequence		E	T	A	R	C	I	R	A	I	Q	G	V	L	N	A	Q	G	A	G	V	N	Y	E	A	F	I	E	Q	Q	T	R	E	V	S	Q	A	A	W	F	S	R	S	I	D	C	Q	N	L	T	G	K	K	A	V	V	F	G	D	N	T	H	A	A	.	.	.	.	.	A	M	T	K	I	L	S	R	E	M	G	I
Template Known Secondary structure																T	T	T																T									S					T	T	T	T														.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.						.	.	.	.	.	.	320	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.															.	.	.	.	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Query Sequence		E	N	I	F	K	D	S	R	V	P	W	P	Q	V	S	R	E	Q	V	L	A	R	S	P	Q	A	I	V	I	T	G	G	P	D	Q	I	P	K	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	W	G	E	Q	L	K	I	P	V	I	P	L	T	.	.	.	.	.	S	D	W	F	E	R
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		H	V	V	W	A	G	T	Y	C	K	Y	D	A	D	W	F	R	A	E	V	A	G	F	C	D	E	V	L	I	T	D	D	H	T	V	V	G	D	A	I	A	R	V	E	P	A	A	I	F	G	T	Q	M	E	R	H	V	G	K	R	L	N	I	P	C	G	V	I	A	A	P	I	H	I	Q	D	F	P	V	G
Template Known Secondary structure									S		G	G	G									T	T	T	S	S																					S																T							S	S	S			G	G	G	S		S	S
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		247	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		A	S	P	R	I	I	L	.	A	A	Q	Q	L	C	N	A	L	S	Q
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		Y	R	P	F	L	G	Y	E	G	T	N	Q	L	V	D	L	I	Y	N
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions