Job Description P37028 Confidence 96.07% Date Thu Jan 5 11:54:36 GMT 2012 Rank 21 Aligned Residues 152 % Identity 11% Template c2xdqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		N	T	E	L	A	F	A	A	G	I	T	P	V	G	V	S	S	Y	S	D	Y	P	P	Q	A	Q	K	I	E	Q	V	S	T	W	Q	G	M	N	L	E	R	I	V	A	L	K	P	D	L	V	I	A	W	R	G	G	N	A	E	R	Q	V	D	Q	L	A	S	L	G	I	K	V	M	W	V	D	.	A	T	S
Query Conservation																																																																														.
Alig confidence																							.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																							.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	L	E	L	K	K	Q	G	I	K	V	S	G	W	L	P	A	K	R	Y	.	.	.	.	T	E	L	P	V	I	D	E	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	A	G	V	N	P	F	L	S	R	T	A	T	T	L	I	R	R	R	K	C	Q	L	I	T	A	P	F	P	I	G
Template Known Secondary structure							G	G	G	T								S		S	S	G	.	.	.	.	G	G						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	T	T											T	T										S	B
Template Predicted Secondary structure																							.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.														.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																				.																																																.	.	.
Query SS confidence																				.																																																.	.	.
Query Sequence		I	E	Q	I	A	N	A	L	R	Q	L	A	P	W	S	P	Q	P	.	D	K	A	E	Q	A	A	Q	S	L	L	D	Q	Y	A	Q	L	K	A	Q	Y	A	D	K	P	K	K	R	V	F	L	Q	F	G	I	N	P	P	F	T	S	G	K	E	S	I	Q	.	.	.	N	Q	V	L	E	V	C	G	G	E	N
Query Conservation																				.																																																.	.	.
Alig confidence																				.																							.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	D	G	T	R	T	W	I	E	Q	I	C	A	T	F	G	I	Q	P	Q	G	L	A	E	R	E	A	E	T	W	Q	K	L	S	D	Y	L	E	L	V	R	.	.	.	.	.	.	.	.	.	.	.	.	G	K	S	V	F	F	M	G	D	N	L	L	E	I	S	L	A	R	F	L	I	R	C	G	M	R	V
Template Known Secondary structure																T	T					S											T	T								T	.	.	.	.	.	.	.	.	.	.	.	.	T									S	S												T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.													.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200																															.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	F	K	D	S	R	V	P	W	P	Q	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	Q	V	L	A	R	S	P	Q	A	I	V
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	I	G	I	P	Y	M	D	K	R	Y	Q	A	A	E	L	A	L	L	S	Q	T	C	A	E	M	G	H	P	L	P	T	I	V	E	K	P	D	N	Y	N	Q	L	Q	R	I	K	A	L	Q	P	D	L	V	I
Template Known Secondary structure							S																					T	T									S																S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions