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Job DescriptionP37028
Confidence100.00%DateThu Jan 5 11:54:36 GMT 2012
Rank17Aligned Residues242
% Identity18%Templatec2x4lA_
PDB info PDB header:transportChain: A: PDB Molecule:ferric-siderophore receptor protein; PDBTitle: crystal structure of dese, a ferric-siderophore receptor2 protein from streptomyces coelicolor
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.... .....60..... ....70.........80.........
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Query Sequence  NAAPRVITLSPANTELAFAAGITPVGVSSYSDYP. . . . . . . . . . PQAQKIEQVST. WQGMNLERIVALKPDLVIAWRGGN
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Template Sequence  KVPANIVAFTGV. AAALFDYGVEVKGVFGPTTTKDGKPDVQAGDLDVDKVTVLGNEWGKLNVEKYASLAPEVLITTTFDT
Template Known Secondary structure  S

SS.TT


SSS
B
TTS
B
GGGTT

TTTSSSTT


T

S
ST
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   67..70........ .80.........90.........100.........110.........120.........130.........140.....
 
   90 .........100........ .110.........120.........130........ .140.........150........
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Query Sequence  A. . . . . . . ERQVDQLASLGIKVMWVD. ATSIEQIANALRQLAPWSPQPDKAEQAAQS. . . LLDQYAQLKAQYADKPKKRV
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Template Sequence  AGTLWSVPEESKDKVAKLAPSVAISVFDRQLTQPLQRMWELAESLGADMKAKKVTDAKAAFDKAAARLRAAAKAKPEIRV
Template Known Secondary structure  T


TTS
GGGS

SSS
TTT

TTS
TT
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   146...150.........160.........170.........180.........190.........200.........210.........220.....
 
   159160... ......170....... ..180........ .190.........200.........210.........220....
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Query Sequence  FLQFG. INPPFTSGKESIQN. QVLEVCGGENI. . . . . . FKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKI. . . . . .
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Template Sequence  LAGSASPDLFYVSGTNLSVDLEYFKALGVNFVEPSEDAKKATGGWFESLSWENVDKYPADVIIMDDRASTIQPADITEGT
Template Known Secondary structure 
SS
STT
TT




TTTTGGGTTSGGGTTSS

S
STTSB
GGG


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   226...230.........240.........250.........260.........270.........280.........290.........300.....
 
   225....230.........240.........250.........260....
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Query Sequence  KQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQ
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Template Sequence  WKQLPAVKAGQVIARSPEPILSYD. KCTPLLDNLAEAIEN
Template Known Secondary structure  T
TT

SS

SS.
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   306...310.........320......... 330.........340....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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