Job Description P37028 Confidence 100.00% Date Thu Jan 5 11:54:36 GMT 2012 Rank 3 Aligned Residues 239 % Identity 26% Template c2r7aC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:bacterial heme binding protein; PDBTitle: crystal structure of a periplasmic heme binding protein2 from shigella dysenteriae Resolution 2.05 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		A	P	R	V	I	T	L	S	P	A	N	T	E	L	A	F	A	A	G	I	T	P	.	.	V	G	V	S	S	Y	S	D	Y	P	P	Q	A	Q	K	I	E	Q	V	S	T	W	Q	G	M	N	L	E	R	I	V	A	L	K	P	D	L	V	I	A	W	R	G	G	N	A	E	R	Q	V	D	Q	L	A	S	L
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		A	E	R	I	V	V	A	G	G	S	L	T	E	L	I	Y	A	M	G	A	G	E	R	V	V	G	V	D	E	T	T	S	Y	P	P	E	T	A	K	L	P	H	I	G	Y	W	K	Q	L	S	S	E	G	I	L	S	L	R	P	D	S	V	I	T	W	Q	D	A	G	P	Q	I	V	L	D	Q	L	R	A	Q
Template Known Secondary structure									S										T	T		G	G	G						T	T				S	G	G	G	T	T	S		B		S	B	T	T	B								T	T			S						T	T		S											T
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		101	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure											.	.																																														.	.	.
Query SS confidence											.	.																																														.	.	.
Query Sequence		G	I	K	V	M	W	V	D	A	.	.	T	S	I	E	Q	I	A	N	A	L	R	Q	L	A	P	W	S	P	Q	P	D	K	A	E	Q	A	A	Q	S	L	L	D	Q	Y	A	Q	L	K	A	Q	Y	A	D	K	P	.	.	.	K	K	R	V	F	L	Q	F	G	I	N	P	P	F	T	S	G	K	E	S	I
Query Conservation											.	.																																														.	.	.
Alig confidence											.	.																																														.	.	.
Template Conservation
Template Sequence		K	V	N	V	V	T	L	P	R	V	P	A	T	L	E	Q	M	Y	A	N	I	R	Q	L	A	K	T	L	Q	V	P	E	Q	G	D	A	L	V	T	Q	I	N	Q	R	L	E	R	V	Q	Q	N	V	A	A	K	K	A	P	V	K	A	M	F	I	L	S	A	G	G	S	A	P	Q	V	A	G	K	G	S	V
Template Known Secondary structure		T										S																	T	T																										S	S	S											T	T								B	T	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220								.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.
Query Sequence		Q	N	Q	V	L	E	V	C	G	G	E	N	I	F	K	D	S	R	V	P	W	P	Q	V	S	R	E	Q	V	L	A	R	S	P	Q	A	I	V	I	T	G	G	P	D	Q	.	.	.	.	.	.	.	I	P	K	I	K	Q	Y	W	G	E	Q	L	K	I	P	V	I	P	L	T	S	D	W	F	E	R	A	S
Query Conservation																																															.	.	.	.	.	.	.
Alig confidence																		.	.																												.	.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		A	D	A	I	L	S	L	A	G	A	E	N	V	A	T	H	.	.	Q	Q	Y	K	S	Y	S	A	E	S	L	I	A	A	N	P	E	V	I	V	V	T	S	Q	M	V	D	G	D	I	N	R	L	R	S	I	A	G	I	T	H	T	A	A	W	K	N	Q	R	I	I	T	V	D	Q	N	L	I	L	G	M	G
Template Known Secondary structure										T							S	.	.	B	S															S										T	T		G	G	G	G	G	G	S	T	T	G	G	G	S					T	T							G	G	G	S	S	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	I	I	L	A	A	Q	Q	L	C	N	A	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	I	A	D	V	V	E	S	L	H	Q	Q	L	W
Template Known Secondary structure		T	T													S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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