Job Description P37028 Confidence 100.00% Date Thu Jan 5 11:54:36 GMT 2012 Rank 4 Aligned Residues 239 % Identity 21% Template c2r79A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein; PDBTitle: crystal structure of a periplasmic heme binding protein from2 pseudomonas aeruginosa Resolution 2.40 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		A	P	R	V	I	T	L	S	P	A	N	T	E	L	A	F	A	A	G	I	T	P	.	.	V	G	V	S	S	Y	S	D	Y	P	P	Q	A	Q	K	I	E	Q	V	S	T	W	Q	G	M	N	L	E	R	I	V	A	L	K	P	D	L	V	I	A	W	R	G	G	N	A	E	R	Q	V	D	Q	L	A	S	L
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		P	Q	R	W	V	S	A	G	G	S	L	S	E	W	V	V	A	L	G	G	E	S	K	L	V	G	V	D	T	T	S	Q	H	P	Q	A	L	K	Q	L	P	S	V	G	Y	Q	R	Q	L	A	A	E	G	V	L	A	L	R	P	D	I	L	I	G	T	E	E	M	G	P	P	P	V	L	K	Q	L	E	G	A
Template Known Secondary structure				S					S										T	T		G	G	G						T	T				S	G	G	G	G	G	S		B				G	G	G								T	T			S						T	T													T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure											.																																									.	.	.	.													.	.
Query SS confidence											.																																									.	.	.	.													.	.
Query Sequence		G	I	K	V	M	W	V	D	A	.	T	S	I	E	Q	I	A	N	A	L	R	Q	L	A	P	W	S	P	Q	P	D	K	A	E	Q	A	A	Q	S	L	L	D	Q	Y	A	Q	L	K	A	Q	.	.	.	.	Y	A	D	K	P	K	K	R	V	F	L	Q	.	.	F	G	I	N	P	P	F	T	S	G	K	E
Query Conservation											.																																									.	.	.	.													.	.
Alig confidence											.																																									.	.	.	.													.	.
Template Conservation
Template Sequence		G	V	R	V	E	T	L	S	A	K	P	D	L	E	A	L	E	S	N	L	K	K	L	G	D	W	L	G	V	P	Q	R	A	E	A	A	E	L	D	Y	R	Q	R	L	R	R	Q	A	D	W	I	A	A	A	Q	K	S	Q	P	A	P	G	V	L	L	V	I	G	N	A	G	G	Q	L	L	V	A	G	R	N
Template Known Secondary structure		T										S	S																T																											T	T	T	S												T	T								B	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.											.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		S	I	Q	N	Q	V	L	E	V	C	G	G	E	N	I	F	K	D	S	R	V	P	W	P	Q	V	S	R	E	Q	V	L	A	R	S	P	Q	A	I	V	I	T	G	G	P	D	Q	I	P	K	I	.	.	.	.	.	.	.	.	.	.	K	Q	Y	W	G	E	Q	L	K	I	P	V	I	P	L	T	S	.	D
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																				.	.																																.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																				.	.
Template Sequence		T	G	G	D	W	V	L	N	R	A	G	A	R	N	L	A	T	H	.	.	E	G	Y	K	P	I	S	V	E	A	L	A	A	L	D	P	V	A	V	V	I	A	D	R	S	L	E	G	D	A	A	R	A	A	L	L	K	Q	N	P	G	L	A	P	T	R	A	A	R	D	G	R	L	L	V	L	D	P	T	L
Template Known Secondary structure		S									T	T							S	.	.	B	S															S							S	S															G	G	G	T	T	S					T	T							G	G	G
Template Predicted Secondary structure																				.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	F	E	R	A	S	P	R	I	I	L	A	A	Q	Q	L	C	N	A	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	G	G	L	G	P	R	L	P	D	G	L	A	A	L	S	A	A	F	Y
Template Known Secondary structure		G	S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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