Job Description P76045 Confidence 65.04% Date Thu Jan 5 12:17:48 GMT 2012 Rank 37 Aligned Residues 191 % Identity 17% Template d2pora_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.80

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	S	A	G	K	R	G	T	W	F	D	R	P	E	L	E	V	H	Y	Q	F	L	E	N	D	D	F	S	F	G	L	T	G	G	F	R	N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	A	N	M	Q	R	W	K	I	A	P	D	W	D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y
Query Conservation
Alig confidence																																							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	P	Y	L	T	G	D	E	R	L	T	A	E	D	N	P	V	L	L	Y	T	Y	S	A	G	A	F	S	V	A	A	S	M	S	D	G	.	.	K	V	G	E	T	S	E	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	E	M	A	V	A	A	A	Y	T	F	G	N	Y	T	V	G	L
Template Known Secondary structure		S				S	S	B	T	T	S	S		B	T	T	B										T	T										S	.	.	B	S	T	T	S	S		B		.	.	.	.	.	.	.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure																																							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.														.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.										.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																						.																							.	.	.	.	.	.	.	.	.
Query SS confidence																						.																							.	.	.	.	.	.	.	.	.
Query Sequence		K	F	A	N	D	L	N	T	T	G	Y	A	D	T	R	V	E	T	E	T	.	G	L	Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y	Y	L	E	R	G	F	.	.	.	.	.	.	.	.	.	N	M	D	D	S	R	N	N	G	E	F	S	T	Q	E	I	R	A	Y	L	P	L	T	L	G	N	H	S
Query Conservation																						.																							.	.	.	.	.	.	.	.	.
Alig confidence																						.							.																.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		G	Y	E	K	I	D	S	P	D	T	A	L	M	A	D	M	E	Q	L	E	L	A	A	I	A	K	F	.	G	A	T	N	V	K	A	Y	Y	A	D	G	E	L	D	R	D	F	A	R	A	V	F	D	L	T	P	V	A	A	A	A	T	A	V	D	H	K	A	Y	G	L	S	V	D	S	T	F	G	A	T	T
Template Known Secondary structure									S		T	T	T	S															.	T	T																					T	T					S	S																			T	T
Template Predicted Secondary structure																													.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	P	Y	T	R	I	G	L	D	R	W	S	N	W	D	W	Q	D	D	I	E	R	E	G	H	D	F	N	R	V	G	L	F	Y	G	Y	D	F	Q	N	G	L	S	V	S	L	E	Y	A	F	E	W	Q	D	H	D	E	G	D	S	D	K	F	H	Y	A	G	V	G	V	N	Y	S	F
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.							.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.							.	.
Template Sequence		V	G	G	Y	V	Q	V	L	D	I	D	T	I	D	.	.	.	.	.	.	.	.	.	.	.	.	D	V	T	Y	Y	G	L	G	A	S	Y	D	L	G	G	G	A	S	I	V	G	G	I	A	D	N	D	L	P	.	.	.	.	N	S	D	M	V	A	.	.	D	L	G	V	K	F	K	F
Template Known Secondary structure												T	T	T		.	.	.	.	.	.	.	.	.	.	.	.															T	T												S	S	.	.	.	.	S						.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.							.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.													.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.			.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions