Job Description P76045 Confidence 16.97% Date Thu Jan 5 12:17:48 GMT 2012 Rank 63 Aligned Residues 176 % Identity 15% Template d1tlya_ SCOP info Transmembrane beta-barrels Tsx-like channel Tsx-like channel Resolution 3.01

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	Q	A	E	E	R	N	D	W	H	F	N	I	G	A	M	Y	E	I	E	N	V	E	G	Y	G	E	D	M	D	G	L	A	E	P	S	V	Y	F	N	A	A	N	G	P	W	R	I	A	L	A	Y	Y	Q	E	G	P	V	D	Y	S	A	G	K	R	G	T	W	F	D	R	P	E	L	E	V	H	Y	Q
Query Conservation
Alig confidence											.	.	.	.	.	.																								.	.
Template Conservation											.	.	.	.	.	.																								.	.
Template Sequence		R	F	G	P	Q	I	R	N	D	.	.	.	.	.	.	T	Y	L	E	Y	E	A	F	A	K	K	D	W	F	D	F	Y	G	Y	A	D	A	P	.	.	V	P	L	F	M	E	I	E	P	R	F	S	I	D	K	L	T	N	T	D	L	S	F	G	P	F	K	E	W	Y	F	A	N	N	Y	I	Y	D	M	G
Template Known Secondary structure			S	S	S	S		B			.	.	.	.	.	.												T	T											.	.																		T	S				B	T	T
Template Predicted Secondary structure											.	.	.	.	.	.																								.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
					98	.	100	.	.	.	.	.	.	.	.	.	110	.	.												.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Query SS confidence		.	.	.																.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Query Sequence		.	.	.	F	L	E	N	D	D	F	S	F	G	L	T	G	G	F	.	.	.	.	.	.	.	.	.	.	.	R	N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	A	N	M	Q	R	W	K	I	A	P	D	W	D	V	K	L	.	.	.	.	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A
Query Conservation		.	.	.																.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Alig confidence		.	.	.																.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.													.
Template Conservation																																																																														.
Template Sequence		R	N	K	D	G	R	Q	S	T	W	Y	M	G	L	G	T	D	I	D	T	G	L	P	M	S	L	S	M	N	V	Y	A	K	Y	Q	W	Q	N	Y	G	A	A	N	E	N	E	W	D	G	Y	R	F	K	I	K	Y	F	V	P	I	T	D	L	W	G	G	Q	L	S	Y	I	G	F	T	N	F	.	D	W	G
Template Known Secondary structure		S	S	S	S	S																S	S	S	S															T	T		T	T		S																			T	T												.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.
		160	.	.	.	.	.	.								.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure									.	.	.	.	.	.	.												.																.	.
Query SS confidence									.	.	.	.	.	.	.												.																.	.
Query Sequence		N	D	L	N	T	T	G	.	.	.	.	.	.	.	Y	A	D	T	R	V	E	T	E	T	G	.	L	Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y	.	.	Y	L	E	R	G	F	N	M	D	D
Query Conservation									.	.	.	.	.	.	.												.																.	.
Alig confidence									.	.	.	.	.	.	.												.																.	.
Template Conservation
Template Sequence		S	D	L	G	D	D	S	G	N	A	I	N	G	I	K	T	R	T	N	N	S	I	A	S	S	H	I	L	A	L	N	Y	D	H	W	H	Y	S	V	V	A	R	Y	W	H	D	G	G	Q	W	N	D	D
Template Known Secondary structure				T	T	T	S	S		B		T	T	S	S	B	S	B		S														S	S												S	G	G	G	B		T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions