Job Description P76045 Confidence 92.19% Date Thu Jan 5 12:17:48 GMT 2012 Rank 28 Aligned Residues 275 % Identity 15% Template d1phoa_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.00

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70													.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																		.											.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.											.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	C	A	Q	A	E	E	R	N	D	W	H	F	N	I	G	A	M	Y	E	I	E	N	V	E	G	Y	G	E	D	M	D	.	G	L	A	E	P	S	V	Y	F	N	.	A	A	N	G	P	W	R	I	A	L	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	E	G	P	V	D	Y	S	A	G	K
Query Conservation																																		.											.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.											.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	G	E	T	Q	I	N	D	Q	L	T	G	Y	G	R	W	E	A	E	F	A	G	N	K	A	E	S	D	T	A	Q	Q	K	T	R	L	A	F	A	G	L	K	Y	K	D	L	G	S	F	D	Y	G	R	N	L	G	A	L	Y	D	V	E	A	W	T	D	M	F	P	E	F	G	G	D	S	S	A	Q	T
Template Known Secondary structure									S	S	S													S	S	S		T	T																	T	T	T											S	T					T	T	T			S	S	S			S		S	S			T
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	T	W	F	D	R	P	E	L	E	V	H	Y	Q	F	L	E	N	D	D	F	S	F	G	L	T	G	G	F	R	N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	A	N	M	Q	R	W	K	I	A	P	D	W	D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A	N	D	L
Query Conservation
Alig confidence																																	.	.
Template Conservation																																	.	.
Template Sequence		D	N	F	M	T	K	R	A	S	G	L	A	T	Y	R	N	T	D	F	F	G	V	I	D	G	L	N	L	T	L	Q	.	.	Y	Q	G	K	N	E	N	R	D	V	K	K	Q	N	G	D	G	F	G	T	S	L	T	Y	D	F	G	G	S	D	F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	Q	N
Template Known Secondary structure		T	S	T	T	T	S												S	T	T	T	T		T	T							.	.					B		S	S		S	T	T		B		S											T	T	T	T														G	G	G	T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		N	T	T	G	Y	A	D	T	R	V	E	T	E	T	.	G	L	Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y	Y	L	E	R	G	F	N	M	D	D	S	R	N	N	G	E	F	S	T	Q	E	I	R	A	Y	L	P	L	T	L	G	N	H	S	V	T	P	Y	T	R	I	G	L	D	R	W	S	N	W
Query Conservation																.
Alig confidence																.									.												.	.																											.
Template Conservation																									.												.	.																											.
Template Sequence		L	Q	S	R	G	T	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	A	N	N	.	I	Y	L	A	T	F	Y	S	E	T	R	.	.	K	M	T	P	I	T	G	G	F	A	N	K	T	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	.	G	L	R	P	S	L	G	Y	V	L	S	K	G	K	D	I
Template Known Secondary structure		T	S	S	S	S		S	S														T	T	.												.	.	S		S			S	S	S	S		S														S	S	.	S														S	B
Template Predicted Secondary structure																									.												.	.																											.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		D	W	Q	D	D	I	E	R	E	G	H	D	F	N	R	V	G	L	F	Y	G	Y	D	F	Q	N	G	L	S	V	S	L	E	Y	A	F	E	W	Q	D	H	D	E	G	D	S	.	D	K	F	H	Y	A	G	V	G	V	N	Y	S	F
Query Conservation																																																.
Alig confidence					.	.	.	.																																								.
Template Conservation					.	.	.	.
Template Sequence		E	G	I	.	.	.	.	G	D	E	D	L	V	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L	D	S	D	N	K	L	N	I	N	N	D	D	I	V	A	V	G	M	T	Y	Q	F
Template Known Secondary structure		T	T	T	.	.	.	.	B																S	S	S	S														S	S		T	T
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		284	.	.					.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions