Job Description P76045 Confidence 85.64% Date Thu Jan 5 12:17:48 GMT 2012 Rank 33 Aligned Residues 205 % Identity 13% Template d1osma_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.20

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		R	P	E	L	E	V	H	Y	Q	F	L	E	N	D	D	F	S	F	G	L	T	G	G	F	R	N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	A	N	M	Q	R	.	.	.	.	.	.	W	K	I	A	P	D	W	D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A	N	D	L
Query Conservation																																														.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	N	G	V	A	T	Y	R	N	S	D	F	F	G	L	V	D	G	L	N	F	A	L	Q	Y	Q	G	K	N	G	S	V	S	G	E	G	A	T	N	N	G	R	G	A	L	K	Q	N	G	D	G	F	G	T	S	V	T	Y	D	I	F	D	G	I	S	A	G	F	A	Y	A	N	S	K	R	T	D	D	Q
Template Known Secondary structure												S	S	G	G	G	S	S	T	T											B			S	S	T	T	T			T	T				G	G	G		B		S												T	T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		163	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																																																						.
Query SS confidence											.	.																																																						.
Query Sequence		N	T	T	G	Y	A	D	T	R	.	.	V	E	T	E	T	G	L	Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y	Y	L	E	R	G	F	N	M	D	D	S	R	N	N	G	E	F	S	T	Q	E	I	R	A	Y	L	P	L	T	L	G	N	.	H	S	V	T	P	Y	T	R	I	G	L	D	R	W	S
Query Conservation											.	.																																																						.
Alig confidence											.	.														.													.																											.												.	.	.	.
Template Conservation																										.													.																																							.	.	.	.
Template Sequence		N	Q	L	L	L	G	E	G	D	H	A	E	T	Y	T	G	G	L	K	Y	D	A	N	N	.	I	Y	L	A	T	Q	Y	T	Q	T	Y	N	.	A	T	R	A	G	S	L	G	F	A	N	K	A	Q	N	F	E	V	A	A	Q	Y	Q	F	D	F	G	L	R	P	S	V	A	Y	L	Q	S	K	.	.	.	.
Template Known Secondary structure			T	S	S	B				S														T	T	.												S	.		S			T	T	T				S														T	T	S												.	.	.	.
Template Predicted Secondary structure																										.													.																																							.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.					.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		N	W	D	W	Q	D	D	I	E	R	E	G	H	D	F	N	R	V	G	L	F	Y	G	Y	D	F	Q	N	G	L	S	V	S	L	E	Y	A	F	E	W	Q	D	H	D	E	G	.	.	.	.	D	S	D	K	F	H	Y	A	G	V	G	V	N	Y	S	F
Query Conservation																																																.	.	.	.
Alig confidence		.	.																																													.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	K	D	L	N	G	Y	G	D	Q	D	I	L	K	Y	V	D	V	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	K	I	N	L	L	D	D	N	S	F	T	R	S	A	G	I	S	T	D	D	V	V	A	L	G	L	V	Y	Q	F
Template Known Secondary structure		.	.					S	S	S		S																	T	T																						T				S
Template Predicted Secondary structure		.	.
Template SS confidence
				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions