Job Description P76045 Confidence 98.15% Date Thu Jan 5 12:17:48 GMT 2012 Rank 7 Aligned Residues 215 % Identity 13% Template c3sljA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant Resolution 2.48 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	K	R	G	T	W	F	D	R	P	E	L	E	V	H	Y	Q	F	L	E	N	D	D	F	S	F	G	L	T	G	G	F	R	N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	A	N	M	Q	R	W	K	I	A	P	D	W	D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A
Query Conservation
Alig confidence																					.																													.	.
Template Conservation																					.																													.	.
Template Sequence		S	G	G	F	S	D	N	Y	T	H	V	Q	V	G	V	D	K	K	H	.	E	L	D	G	L	D	L	F	T	G	F	T	V	T	H	T	D	S	S	A	S	A	D	V	F	S	G	K	.	.	T	K	S	V	G	A	G	L	Y	A	S	A	M	F	D	S	G	A	Y	I	D	L	I	G	K	Y	V	H	H	D
Template Known Secondary structure		T	T	T																	.			T	T																			S	S					.	.															T	T	S
Template Predicted Secondary structure																					.																													.	.
Template SS confidence
		1053	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.		.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.			1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.										.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.																.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	D	L	N	T	T	G	Y	A	D	T	R	.	.	.	.	.	.	.	.	.	V	E	T	E	T	G	L	Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y	Y	L	E	R	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	M	D	D	S	R	N	N	G	E	F	S	T	Q	E	I	R
Query Conservation														.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	Y	T	A	T	F	A	G	L	G	T	R	D	Y	S	T	H	S	W	Y	A	G	A	E	A	G	Y	R	Y	H	V	T	E	D	A	W	I	E	P	Q	A	E	L	V	Y	G	S	V	S	G	K	Q	F	A	W	K	D	Q	G	M	H	L	S	M	K	D	K	D	Y	N	P	L	I	G	R	T	G	V	D
Template Known Secondary structure							S	S	T	T																							S	S	S	S														B										T	T										B
Template Predicted Secondary structure
Template SS confidence
		1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.										250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.
Query Sequence		A	Y	L	P	L	T	L	G	N	H	S	V	T	P	Y	T	R	I	G	L	D	R	W	S	N	W	D	W	Q	D	D	I	E	R	.	.	.	.	.	.	.	.	.	E	G	H	D	F	N	R	V	G	L	F	Y	G	Y	D	F	Q	N	G	L	S	V	S	L	E	Y	A	F	E	W	Q	D	H	D	E	G	D
Query Conservation																																				.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		V	G	K	S	F	S	G	K	D	W	K	V	T	A	R	A	G	L	G	Y	Q	F	D	L	L	A	N	G	E	T	V	L	R	D	A	S	G	E	K	R	I	K	G	E	K	D	S	R	M	L	M	S	V	G	L	N	A	E	I	R	D	N	V	R	F	G	L	E	F	E	K	S	.	.	.	.	A	F	G	K
Template Known Secondary structure									T	T															S											T	T																								T	T	T											.	.	.	.		S	S	S
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.					.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	K	F	H	Y	A	G	V	G	V	N	Y	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	N	V	D	N	A	V	N	A	N	F	R	Y	S	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1286	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions