Return to main results Retrieve Phyre Job Id

Job DescriptionP76045
Confidence10.56%DateThu Jan 5 12:17:48 GMT 2012
Rank69Aligned Residues202
% Identity13%Templatec3efmA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:ferric alcaligin siderophore receptor; PDBTitle: structure of the alcaligin outer membrane recepteur faua from2 bordetella pertussis
Resolution2.33 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100.........110.........120.........130.........140..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  PWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVK
Query Conservation   
 
 
        
           
 
  
             
    
                   
   
   
 
Alig confidence 













































































.
Template Conservation    
                                                              
            . 
Template Sequence  GDRWSDWKTKQMYFGSRREYRIKNQFTPYAGLTYDINDTYTAYASYTEIFQPQNARDTSGGILPPIKSKSYELGLKAA. Y
Template Known Secondary structure  TT
SSS



B
SSS
B


.
Template Predicted Secondary structure 











































.
Template SS confidence 















































































   395....400.........410.........420.........430.........440.........450.........460.........470.. .
 
   143......150.........160.........170.. .......180.........190.........200......
Predicted Secondary structure 













................


















Query SS confidence 





























. . . . . . . . . . . . . . . .

































Query Sequence  LTDDLRFNGWLSMYKFANDLNTTGYADTRV. . . . . . . . . . . . . . . . ETETGLQYTFNETVALRVNYYLERGFNMDDSRNN
Query Conservation    
     

   
   
        
   ................
 
 
  



        

     
       
Alig confidence 





























................

































Template Conservation                                        
       
 
                 

            
Template Sequence  LEGRLNTSAALFQTRQDNLAQVIPGSSIPGFPNMQASRAASGAKVEGIDLEASGQILPDWNIGASYTHFTTKDASGNPIN
Template Known Secondary structure  GGGTS
TT


TTSSSS




TT
TTS
B

Template Predicted Secondary structure 

























Template SS confidence 















































































   474.....480.........490.........500.........510.........520.........530.........540.........550...
 
   207..210.........220.........230.........240.........250.........260.........270....
Predicted Secondary structure 






















Query SS confidence 



































































Query Sequence  GEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSNWDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLE
Query Conservation        


          



  
  
                    
 

   
 

    
  
Alig confidence 

































.........
























Template Conservation     
         
                
   .........    
   

   
       
 
 
Template Sequence  TNHPRSLFKLYTTYRLPGALHRLTVGGGVDWQSR. . . . . . . . . MQDSYALVSLMARFDFNKKLSATLN
Template Known Secondary structure 
SS
S
SSTTTT
.........



TT
Template Predicted Secondary structure 










.........




Template SS confidence 



































































   554.....560.........570.........580....... ..590.........600.........610..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions