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Job DescriptionP76045
Confidence97.68%DateThu Jan 5 12:17:48 GMT 2012
Rank11Aligned Residues231
% Identity10%Templatec2qomB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain.
Resolution2.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80.........90.........100.........110.........120.........130.........140
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Query Sequence  NGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWD
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Template Sequence  RDEAGAWARIMSGTGSA. . SGGFSDNYTHVQVGVDKKHELG. . LDLFTGFTVTHTDSSASADVFSGK. . TKSVGAGLYAS
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   1033......1040......... 1050.........1060.........1070. ........1080.........1090..... ....1100......
 
   141........150.........160... ......170. ........180.........190........ .200..
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Query Sequence  VKLTDDLRFNGWLSMYKFANDLN. TTGYADTR. . . . . VETETGLQYTFNETVALRVNYYLERGF. . . . . . . . . . . . NMDD
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Template Sequence  AMFDSGAYIDLIGKYVHHDNEYTATFATRDYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAWKDGMHLSM
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   1111........1120.........1130.........1140.........1150.........1160.........1170.........1180.........1190
 
   203......210.........220.... .....230.........240...... ...250.........260.........270..
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Query Sequence  SRNNGEFSTQEIRAYLPLTLGN. HSVTPYTRIGLDRWSNWDWQDD. . . . . . . . . IEREGHDFNRVGLFYGYDFQNGLSVS
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Template Sequence  KDKDYNPLIGRTGVDVGKSFSGKWKVTARAGLGYQFDLLANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFG
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   1195....1200.........1210.........1220.........1230.........1240.........1250.........1260.........1270....
 
   273......280.........290.........300.
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Query Sequence  LEYAFEWQDHDEGDSDKFHYAGVGVNYSF
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Template Sequence  LEFEKSA. . . . FGKYNVDNAVNANFRYSF
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   1276...1280.. .......1290.........1300
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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