Job Description P76045 Confidence 27.66% Date Thu Jan 5 12:17:48 GMT 2012 Rank 55 Aligned Residues 215 % Identity 12% Template c1xkhC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:ferripyoverdine receptor; PDBTitle: pyoverdine outer membrane receptor fpva from pseudomonas aeruginosa2 pao1 bound to pyoverdine Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	G	P	W	R	I	A	L	A	Y	Y	Q	E	G	P	V	D	Y	S	A	G	K	R	G	T	W	F	D	R	P	E	L	E	V	H	Y	Q	F	L	E	N	D	D	F	S	F	G	L	T	G	G	F	R	N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	A	N	M	Q	R	W	K	I	A	P	D	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	L	N	L	F	L	G	G	R	V	V	D	Y	R	V	T	G	L	N	P	T	I	R	E	S	G	R	F	I	P	Y	V	G	A	V	Y	D	L	N	D	T	Y	S	V	Y	A	S	Y	T	D	I	F	X	P	Q	D	S	W	Y	R	D	S	S	N	K	L	L	E	P	D	E	G	Q	N	Y	E	I	G	I
Template Known Secondary structure		S	S																S	S	S	S																			S	S	S																T	T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
		140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure						.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	K	L	.	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A	N	D	L	N	T	T	G	Y	A	D	T	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	E	T	G	L	Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y	Y	L	E	R	G	F	N	M	D
Query Conservation						.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	E	Y	L	D	G	R	L	N	T	S	L	A	Y	F	E	I	H	E	E	N	R	A	E	E	D	A	L	Y	N	S	K	P	T	N	P	A	I	T	Y	A	Y	K	G	I	K	A	K	T	K	G	Y	E	A	E	I	S	G	E	L	A	P	G	W	Q	V	Q	A	G	Y	T	H	K	I	I	R	D	D	S
Template Known Secondary structure						T	T	T	T																				S	S	T	T	S					T	T		S																					S	S	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																							.	.	.	.													.	.	.
Query SS confidence																							.	.	.	.													.	.	.
Query Sequence		D	S	R	N	N	G	E	F	S	T	Q	E	I	R	A	Y	L	P	L	T	L	.	.	.	.	G	N	H	S	V	T	P	Y	T	R	I	G	.	.	.	L	D	R	W	S	N	W	D	W	Q	D	D	I	E	R	E	G	H	D	F	N	R	V	G	L	F	Y	G	Y	D	F	Q	N	G	L	S	V	S	L	E
Query Conservation																							.	.	.	.													.	.	.
Alig confidence																							.	.	.	.													.	.	.
Template Conservation
Template Sequence		G	K	K	V	S	T	W	E	P	Q	D	Q	L	S	L	Y	T	S	Y	K	F	K	G	A	L	D	K	L	T	V	G	G	G	A	R	W	Q	G	K	S	W	Q	X	V	Y	N	N	P	R	S	R	W	E	K	F	S	Q	E	D	Y	W	L	V	D	L	X	A	R	Y	Q	I	T	D	K	L	S	A	S	V	N
Template Known Secondary structure				B			T	T	S		S													G	G	G	T	T																				G	G	G																							S	S	S
Template Predicted Secondary structure
Template SS confidence
		701	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions