Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFF4
Confidence3.50%DateThu Jan 5 11:26:06 GMT 2012
Rank43Aligned Residues34
% Identity15%Templated2oara1
SCOP infoGated mechanosensitive channel Gated mechanosensitive channel Gated mechanosensitive channel
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   384.....390.........400.........410.......
Predicted Secondary structure 














Query SS confidence 

































Query Sequence  WLIFAGYSVVLAFAFMAMFKYKHVRVPTGTQTVS
Query Conservation 
 
 
       
                    
Alig confidence 

































Template Conservation 




 



 

   
              
  
Template Sequence  FFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVV
Template Known Secondary structure  TTT



Template Predicted Secondary structure 









Template SS confidence 

































   7980.........90.........100.........110..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions